Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGB3Q9Y5G1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGB3Q9Y5G1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.52■□□□□ 0.71
PCDHGB3Q9Y5G1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGB3Q9Y5G1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 KRT87P-202ENST00000534226 1464 ntBASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 RARRES2P11-201ENST00000635158 484 ntBASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.5■□□□□ 0.71
PCDHGB3Q9Y5G1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 AC092437.1-201ENST00000624794 1048 ntBASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHGB3Q9Y5G1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 GABARAPL3-202ENST00000624044 1851 ntBASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 IKBKGP1-201ENST00000612193 1073 ntBASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 AC008175.2-201ENST00000612840 297 ntBASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB3Q9Y5G1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 AC006128.1-201ENST00000624704 1661 ntBASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 POU5F1P4-201ENST00000413175 1085 ntBASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 RNF165-205ENST00000588679 2904 ntBASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB3Q9Y5G1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms