Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PKP3Q9Y446 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP3Q9Y446 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP3Q9Y446 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 AC092437.1-201ENST00000624794 1048 ntBASIC20.68■□□□□ 0.9
PKP3Q9Y446 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 AC011484.1-201ENST00000377652 1995 ntBASIC20.68■□□□□ 0.9
PKP3Q9Y446 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.68■□□□□ 0.9
PKP3Q9Y446 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PKP3Q9Y446 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.67■□□□□ 0.9
PKP3Q9Y446 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PKP3Q9Y446 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP3Q9Y446 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PKP3Q9Y446 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP3Q9Y446 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP3Q9Y446 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.66■□□□□ 0.9
PKP3Q9Y446 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PKP3Q9Y446 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP3Q9Y446 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
PKP3Q9Y446 AC004911.1-201ENST00000416316 871 ntBASIC20.66■□□□□ 0.9
PKP3Q9Y446 CDV3P1-201ENST00000471403 739 ntBASIC20.66■□□□□ 0.9
PKP3Q9Y446 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.66■□□□□ 0.9
PKP3Q9Y446 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP3Q9Y446 AL591742.1-201ENST00000604433 565 ntBASIC20.66■□□□□ 0.9
PKP3Q9Y446 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.66■□□□□ 0.9
PKP3Q9Y446 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PKP3Q9Y446 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PKP3Q9Y446 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.66■□□□□ 0.9
PKP3Q9Y446 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.66■□□□□ 0.9
PKP3Q9Y446 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP3Q9Y446 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP3Q9Y446 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PKP3Q9Y446 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.65■□□□□ 0.9
PKP3Q9Y446 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.65■□□□□ 0.9
PKP3Q9Y446 AC007322.4-201ENST00000509611 723 ntBASIC20.65■□□□□ 0.9
PKP3Q9Y446 DUX4L16-201ENST00000555130 1264 ntBASIC20.65■□□□□ 0.9
PKP3Q9Y446 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.65■□□□□ 0.9
PKP3Q9Y446 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP3Q9Y446 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PKP3Q9Y446 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PKP3Q9Y446 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
PKP3Q9Y446 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PKP3Q9Y446 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.9
PKP3Q9Y446 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PKP3Q9Y446 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PKP3Q9Y446 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PKP3Q9Y446 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PKP3Q9Y446 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
PKP3Q9Y446 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PKP3Q9Y446 AC007322.3-201ENST00000426526 701 ntBASIC20.64■□□□□ 0.89
PKP3Q9Y446 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.64■□□□□ 0.89
PKP3Q9Y446 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.64■□□□□ 0.89
PKP3Q9Y446 AC231657.2-201ENST00000624556 255 ntBASIC20.64■□□□□ 0.89
PKP3Q9Y446 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PKP3Q9Y446 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.64■□□□□ 0.89
PKP3Q9Y446 PLK5-205ENST00000642079 1969 ntBASIC20.64■□□□□ 0.89
PKP3Q9Y446 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PKP3Q9Y446 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
PKP3Q9Y446 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PKP3Q9Y446 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
PKP3Q9Y446 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PKP3Q9Y446 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PKP3Q9Y446 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PKP3Q9Y446 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms