Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 BX842568.3-201ENST00000418104 571 ntBASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 MIR4466-201ENST00000606121 54 ntBASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2D4Q9Y2X8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2D4Q9Y2X8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2D4Q9Y2X8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2D4Q9Y2X8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2D4Q9Y2X8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2D4Q9Y2X8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 AC005224.4-201ENST00000583262 1652 ntBASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBE2D4Q9Y2X8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.3□□□□□ -0.12
UBE2D4Q9Y2X8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms