Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPH3AQ9Y2J0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 FEM1AP4-201ENST00000443167 1987 ntBASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.84■□□□□ 0.61
RPH3AQ9Y2J0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.83■□□□□ 0.61
RPH3AQ9Y2J0 AC068338.2-201ENST00000563278 1430 ntBASIC18.83■□□□□ 0.61
RPH3AQ9Y2J0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPH3AQ9Y2J0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RPH3AQ9Y2J0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPH3AQ9Y2J0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPH3AQ9Y2J0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPH3AQ9Y2J0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 AL355802.2-201ENST00000402069 882 ntBASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 AC243732.1-201ENST00000612648 864 ntBASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 AL050303.2-201ENST00000619798 666 ntBASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPH3AQ9Y2J0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 AF106564.1-201ENST00000607058 2553 ntBASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 CYP2T1P-201ENST00000432607 1285 ntBASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPH3AQ9Y2J0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 AC007322.4-201ENST00000509611 723 ntBASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RPH3AQ9Y2J0 AL591742.1-201ENST00000604433 565 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms