Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.47■□□□□ 0.87
VPS9D1Q9Y2B5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.47■□□□□ 0.87
VPS9D1Q9Y2B5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VPS9D1Q9Y2B5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 AC087623.3-201ENST00000607047 1098 ntBASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 MYCNOS-205ENST00000641950 531 ntBASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VPS9D1Q9Y2B5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.45■□□□□ 0.87
VPS9D1Q9Y2B5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
VPS9D1Q9Y2B5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 KRT18P61-201ENST00000585825 1298 ntBASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 UBE2DNL-204ENST00000602536 740 ntBASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 LINC01521-201ENST00000504184 1943 ntBASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 FEM1AP1-201ENST00000431297 1995 ntBASIC20.45■□□□□ 0.86
VPS9D1Q9Y2B5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VPS9D1Q9Y2B5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 AC091799.1-201ENST00000422823 811 ntBASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 CDV3P1-201ENST00000471403 739 ntBASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 AC027702.1-201ENST00000563810 1770 ntBASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VPS9D1Q9Y2B5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 AC007322.3-201ENST00000426526 701 ntBASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VPS9D1Q9Y2B5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms