Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SPG7Q9UQ90 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SPG7Q9UQ90 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SPG7Q9UQ90 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SPG7Q9UQ90 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SPG7Q9UQ90 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC27.08■■□□□ 1.93
SPG7Q9UQ90 AC087633.2-202ENST00000565166 1439 ntBASIC27.08■■□□□ 1.93
SPG7Q9UQ90 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC27.08■■□□□ 1.93
SPG7Q9UQ90 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
SPG7Q9UQ90 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SPG7Q9UQ90 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
SPG7Q9UQ90 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC27.08■■□□□ 1.93
SPG7Q9UQ90 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SPG7Q9UQ90 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
SPG7Q9UQ90 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SPG7Q9UQ90 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
SPG7Q9UQ90 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC27.08■■□□□ 1.92
SPG7Q9UQ90 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 SPIB-206ENST00000596074 847 ntTSL 2 BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC27.07■■□□□ 1.92
SPG7Q9UQ90 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 AC242852.2-201ENST00000615738 1807 ntBASIC27.06■■□□□ 1.92
SPG7Q9UQ90 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 KLF2-202ENST00000592003 564 ntTSL 3 BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC27.06■■□□□ 1.92
SPG7Q9UQ90 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC27.05■■□□□ 1.92
SPG7Q9UQ90 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
SPG7Q9UQ90 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SPG7Q9UQ90 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
SPG7Q9UQ90 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
SPG7Q9UQ90 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SPG7Q9UQ90 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC27.05■■□□□ 1.92
SPG7Q9UQ90 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
SPG7Q9UQ90 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SPG7Q9UQ90 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SPG7Q9UQ90 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SPG7Q9UQ90 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SPG7Q9UQ90 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC27.04■■□□□ 1.92
SPG7Q9UQ90 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SPG7Q9UQ90 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC27.04■■□□□ 1.92
SPG7Q9UQ90 Z99916.2-201ENST00000604037 246 ntBASIC27.04■■□□□ 1.92
SPG7Q9UQ90 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SPG7Q9UQ90 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SPG7Q9UQ90 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SPG7Q9UQ90 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
SPG7Q9UQ90 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SPG7Q9UQ90 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
SPG7Q9UQ90 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC27.03■■□□□ 1.92
SPG7Q9UQ90 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SPG7Q9UQ90 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
SPG7Q9UQ90 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC27.03■■□□□ 1.92
SPG7Q9UQ90 MIR4497-201ENST00000583208 89 ntBASIC27.03■■□□□ 1.92
SPG7Q9UQ90 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC27.03■■□□□ 1.92
SPG7Q9UQ90 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 MFF-203ENST00000349901 1716 ntTSL 2 BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
SPG7Q9UQ90 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC27.01■■□□□ 1.92
SPG7Q9UQ90 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SPG7Q9UQ90 ME2-206ENST00000638410 2289 ntTSL 5 BASIC27.01■■□□□ 1.91
SPG7Q9UQ90 ME2-210ENST00000639255 2262 ntTSL 5 BASIC27.01■■□□□ 1.91
SPG7Q9UQ90 PGM5P4-201ENST00000421970 445 ntBASIC27.01■■□□□ 1.91
SPG7Q9UQ90 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC27.01■■□□□ 1.91
SPG7Q9UQ90 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SPG7Q9UQ90 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC27.01■■□□□ 1.91
SPG7Q9UQ90 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms