Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 AC008764.7-201ENST00000593779 1081 ntBASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NIPSNAP3AQ9UFN0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPSNAP3AQ9UFN0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NIPSNAP3AQ9UFN0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 TSPY26P-201ENST00000476365 1326 ntBASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 AC135279.3-201ENST00000610945 1311 ntBASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 BX005040.4-201ENST00000637145 1518 ntBASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPSNAP3AQ9UFN0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NIPSNAP3AQ9UFN0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms