Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.99■□□□□ 0.79
LRIT1Q9P2V4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 AC098590.1-201ENST00000468126 897 ntBASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 AC093827.2-201ENST00000512654 315 ntBASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRIT1Q9P2V4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 RPS2P52-201ENST00000469610 820 ntBASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LRIT1Q9P2V4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRIT1Q9P2V4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
LRIT1Q9P2V4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 AC142381.4-202ENST00000563973 229 ntBASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRIT1Q9P2V4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRIT1Q9P2V4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms