Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 AC026185.1-201ENST00000445748 174 ntBASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 AL591742.1-201ENST00000604433 565 ntBASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PARPBPQ9NWS1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 CDV3P1-201ENST00000471403 739 ntBASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 AL162412.1-201ENST00000567129 965 ntBASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 AC073111.5-205ENST00000641717 521 ntBASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.41■□□□□ 0.54
PARPBPQ9NWS1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 AC007375.3-201ENST00000600936 2314 ntBASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PARPBPQ9NWS1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PARPBPQ9NWS1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.39■□□□□ 0.53
PARPBPQ9NWS1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 CDCA4P2-201ENST00000441182 718 ntBASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PARPBPQ9NWS1 AL049796.1-201ENST00000565336 1766 ntBASIC18.37■□□□□ 0.53
PARPBPQ9NWS1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PARPBPQ9NWS1 FEM1AP4-201ENST00000443167 1987 ntBASIC18.37■□□□□ 0.53
PARPBPQ9NWS1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.37■□□□□ 0.53
PARPBPQ9NWS1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PARPBPQ9NWS1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PARPBPQ9NWS1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PARPBPQ9NWS1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PARPBPQ9NWS1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PARPBPQ9NWS1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.37■□□□□ 0.53
PARPBPQ9NWS1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms