Protein–RNA interactions for Protein: Q9NQV8

PRDM8, PR domain zinc finger protein 8, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8Q9NQV8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PRDM8Q9NQV8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM8Q9NQV8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.32■□□□□ 0.84
PRDM8Q9NQV8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
PRDM8Q9NQV8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM8Q9NQV8 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.32■□□□□ 0.84
PRDM8Q9NQV8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PRDM8Q9NQV8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRDM8Q9NQV8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRDM8Q9NQV8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 RARRES2P4-201ENST00000514074 484 ntBASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 AC142086.2-201ENST00000569753 217 ntBASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 MKRN4P-201ENST00000444706 1521 ntBASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.3■□□□□ 0.84
PRDM8Q9NQV8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRDM8Q9NQV8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 AL512625.2-201ENST00000417533 625 ntBASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 Z98882.1-201ENST00000622160 2253 ntBASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PRDM8Q9NQV8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 CDV3P1-201ENST00000471403 739 ntBASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRDM8Q9NQV8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRDM8Q9NQV8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRDM8Q9NQV8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM8Q9NQV8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PRDM8Q9NQV8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM8Q9NQV8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.26■□□□□ 0.83
PRDM8Q9NQV8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.26■□□□□ 0.83
PRDM8Q9NQV8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRDM8Q9NQV8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms