Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 AC012414.1-201ENST00000556676 535 ntBASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 AC027682.1-201ENST00000562846 899 ntBASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 TPRG1LP1-201ENST00000598702 760 ntBASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 AC125437.2-201ENST00000625180 2167 ntBASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC52A3Q9NQ40 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC52A3Q9NQ40 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 AP001330.3-201ENST00000520123 633 ntBASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SLC52A3Q9NQ40 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC52A3Q9NQ40 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 AC008406.3-201ENST00000620001 1374 ntBASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC52A3Q9NQ40 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC52A3Q9NQ40 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.52■□□□□ 0.71
SLC52A3Q9NQ40 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SLC52A3Q9NQ40 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms