Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 OR10C1-204ENST00000622521 1039 ntBASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 AC116050.2-201ENST00000612102 1779 ntBASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP13A1Q9HD20 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.14■□□□□ 0.98
ATP13A1Q9HD20 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP13A1Q9HD20 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 AC007322.3-201ENST00000426526 701 ntBASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 RARRES2P4-201ENST00000514074 484 ntBASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
ATP13A1Q9HD20 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 FAM21FP-204ENST00000608637 956 ntBASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 AL109923.1-201ENST00000618799 583 ntBASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP13A1Q9HD20 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A1Q9HD20 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A1Q9HD20 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP13A1Q9HD20 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP13A1Q9HD20 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 AC093787.1-201ENST00000450396 207 ntBASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 AC104771.1-201ENST00000603335 964 ntBASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP13A1Q9HD20 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ATP13A1Q9HD20 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 SLC29A4P1-201ENST00000398760 971 ntBASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 TSPY6P-201ENST00000448518 926 ntBASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP13A1Q9HD20 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ATP13A1Q9HD20 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP13A1Q9HD20 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP13A1Q9HD20 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP13A1Q9HD20 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP13A1Q9HD20 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms