Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.65■□□□□ 0.9
MRM3Q9HC36 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.65■□□□□ 0.9
MRM3Q9HC36 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
MRM3Q9HC36 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MRM3Q9HC36 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.65■□□□□ 0.9
MRM3Q9HC36 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MRM3Q9HC36 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.65■□□□□ 0.9
MRM3Q9HC36 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MRM3Q9HC36 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MRM3Q9HC36 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
MRM3Q9HC36 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.64■□□□□ 0.9
MRM3Q9HC36 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MRM3Q9HC36 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
MRM3Q9HC36 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MRM3Q9HC36 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.64■□□□□ 0.89
MRM3Q9HC36 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.64■□□□□ 0.89
MRM3Q9HC36 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRM3Q9HC36 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MRM3Q9HC36 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.64■□□□□ 0.89
MRM3Q9HC36 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MRM3Q9HC36 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRM3Q9HC36 AC034268.1-201ENST00000441047 882 ntBASIC20.64■□□□□ 0.89
MRM3Q9HC36 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.64■□□□□ 0.89
MRM3Q9HC36 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MRM3Q9HC36 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
MRM3Q9HC36 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.64■□□□□ 0.89
MRM3Q9HC36 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRM3Q9HC36 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.64■□□□□ 0.89
MRM3Q9HC36 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MRM3Q9HC36 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRM3Q9HC36 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
MRM3Q9HC36 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.63■□□□□ 0.89
MRM3Q9HC36 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MRM3Q9HC36 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRM3Q9HC36 AL162430.1-201ENST00000480705 870 ntBASIC20.63■□□□□ 0.89
MRM3Q9HC36 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.63■□□□□ 0.89
MRM3Q9HC36 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.63■□□□□ 0.89
MRM3Q9HC36 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.63■□□□□ 0.89
MRM3Q9HC36 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRM3Q9HC36 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.63■□□□□ 0.89
MRM3Q9HC36 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRM3Q9HC36 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
MRM3Q9HC36 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MRM3Q9HC36 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MRM3Q9HC36 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.62■□□□□ 0.89
MRM3Q9HC36 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.62■□□□□ 0.89
MRM3Q9HC36 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.62■□□□□ 0.89
MRM3Q9HC36 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.62■□□□□ 0.89
MRM3Q9HC36 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.62■□□□□ 0.89
MRM3Q9HC36 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 MIR2861-201ENST00000636310 90 ntBASIC20.62■□□□□ 0.89
MRM3Q9HC36 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MRM3Q9HC36 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.62■□□□□ 0.89
MRM3Q9HC36 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRM3Q9HC36 AC092667.1-201ENST00000434301 2586 ntBASIC20.61■□□□□ 0.89
MRM3Q9HC36 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRM3Q9HC36 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
MRM3Q9HC36 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRM3Q9HC36 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRM3Q9HC36 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.61■□□□□ 0.89
MRM3Q9HC36 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
MRM3Q9HC36 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.61■□□□□ 0.89
MRM3Q9HC36 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.61■□□□□ 0.89
MRM3Q9HC36 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.61■□□□□ 0.89
MRM3Q9HC36 NTF6G-201ENST00000591094 616 ntBASIC20.61■□□□□ 0.89
MRM3Q9HC36 UBE2DNL-204ENST00000602536 740 ntBASIC20.61■□□□□ 0.89
MRM3Q9HC36 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRM3Q9HC36 MYCNOS-205ENST00000641950 531 ntBASIC20.61■□□□□ 0.89
MRM3Q9HC36 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRM3Q9HC36 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.61■□□□□ 0.89
MRM3Q9HC36 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRM3Q9HC36 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRM3Q9HC36 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRM3Q9HC36 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.61■□□□□ 0.89
MRM3Q9HC36 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRM3Q9HC36 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRM3Q9HC36 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRM3Q9HC36 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MRM3Q9HC36 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MRM3Q9HC36 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.6■□□□□ 0.89
MRM3Q9HC36 AC007322.3-201ENST00000426526 701 ntBASIC20.6■□□□□ 0.89
MRM3Q9HC36 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.6■□□□□ 0.89
MRM3Q9HC36 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRM3Q9HC36 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MRM3Q9HC36 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRM3Q9HC36 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRM3Q9HC36 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.6■□□□□ 0.89
MRM3Q9HC36 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRM3Q9HC36 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms