Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SUDS3Q9H7L9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SUDS3Q9H7L9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21■□□□□ 0.95
SUDS3Q9H7L9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SUDS3Q9H7L9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21■□□□□ 0.95
SUDS3Q9H7L9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21■□□□□ 0.95
SUDS3Q9H7L9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SUDS3Q9H7L9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SUDS3Q9H7L9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21■□□□□ 0.95
SUDS3Q9H7L9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21■□□□□ 0.95
SUDS3Q9H7L9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21■□□□□ 0.95
SUDS3Q9H7L9 AP001160.3-201ENST00000601484 763 ntBASIC21■□□□□ 0.95
SUDS3Q9H7L9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
SUDS3Q9H7L9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SUDS3Q9H7L9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SUDS3Q9H7L9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SUDS3Q9H7L9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SUDS3Q9H7L9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SUDS3Q9H7L9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 AC061975.6-201ENST00000579045 1553 ntBASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 UBE2DNL-204ENST00000602536 740 ntBASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SUDS3Q9H7L9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SUDS3Q9H7L9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 AC073111.5-205ENST00000641717 521 ntBASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUDS3Q9H7L9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUDS3Q9H7L9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SUDS3Q9H7L9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SUDS3Q9H7L9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
SUDS3Q9H7L9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.95■□□□□ 0.94
SUDS3Q9H7L9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms