Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC42EP4Q9H3Q1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 AC126544.1-201ENST00000580842 1059 ntBASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 AC233992.3-201ENST00000607491 485 ntBASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 TCF3P1-201ENST00000423021 1937 ntBASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC42EP4Q9H3Q1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42EP4Q9H3Q1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CDC42EP4Q9H3Q1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.96■□□□□ 0.95
CDC42EP4Q9H3Q1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.96■□□□□ 0.95
CDC42EP4Q9H3Q1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42EP4Q9H3Q1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42EP4Q9H3Q1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
CDC42EP4Q9H3Q1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.95■□□□□ 0.95
CDC42EP4Q9H3Q1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.95■□□□□ 0.95
CDC42EP4Q9H3Q1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42EP4Q9H3Q1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 AC092720.2-201ENST00000602388 1665 ntBASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42EP4Q9H3Q1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 AC061975.6-201ENST00000579045 1553 ntBASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 AC087289.5-201ENST00000586076 3175 ntBASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CDC42EP4Q9H3Q1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms