Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 AC245052.3-201ENST00000450182 901 ntBASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 AC092667.1-201ENST00000434301 2586 ntBASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC68Q9H2F9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 PLK5-205ENST00000642079 1969 ntBASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC68Q9H2F9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC68Q9H2F9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC68Q9H2F9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC68Q9H2F9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC68Q9H2F9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC68Q9H2F9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC68Q9H2F9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC68Q9H2F9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC68Q9H2F9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC68Q9H2F9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.58■□□□□ 0.88
CCDC68Q9H2F9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC68Q9H2F9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC68Q9H2F9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC68Q9H2F9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC68Q9H2F9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC68Q9H2F9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 RNF165-205ENST00000588679 2904 ntBASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC68Q9H2F9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 AC004854.2-201ENST00000608450 1441 ntBASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 KRT19P1-201ENST00000405746 1186 ntBASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 KRT18P20-201ENST00000548986 1279 ntBASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC68Q9H2F9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC68Q9H2F9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms