Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VPS11Q9H270 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS11Q9H270 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VPS11Q9H270 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS11Q9H270 PBX2P1-201ENST00000493219 1291 ntBASIC20.71■□□□□ 0.91
VPS11Q9H270 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS11Q9H270 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS11Q9H270 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS11Q9H270 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS11Q9H270 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS11Q9H270 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS11Q9H270 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS11Q9H270 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS11Q9H270 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS11Q9H270 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS11Q9H270 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
VPS11Q9H270 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
VPS11Q9H270 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
VPS11Q9H270 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS11Q9H270 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS11Q9H270 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS11Q9H270 BX005040.4-201ENST00000637145 1518 ntBASIC20.7■□□□□ 0.9
VPS11Q9H270 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
VPS11Q9H270 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
VPS11Q9H270 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VPS11Q9H270 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS11Q9H270 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS11Q9H270 AC096631.2-201ENST00000436136 790 ntBASIC20.7■□□□□ 0.9
VPS11Q9H270 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.7■□□□□ 0.9
VPS11Q9H270 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS11Q9H270 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.7■□□□□ 0.9
VPS11Q9H270 AC027682.1-201ENST00000562846 899 ntBASIC20.7■□□□□ 0.9
VPS11Q9H270 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
VPS11Q9H270 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.7■□□□□ 0.9
VPS11Q9H270 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
VPS11Q9H270 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.7■□□□□ 0.9
VPS11Q9H270 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VPS11Q9H270 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS11Q9H270 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VPS11Q9H270 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
VPS11Q9H270 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS11Q9H270 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS11Q9H270 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.69■□□□□ 0.9
VPS11Q9H270 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.69■□□□□ 0.9
VPS11Q9H270 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.69■□□□□ 0.9
VPS11Q9H270 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VPS11Q9H270 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VPS11Q9H270 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS11Q9H270 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VPS11Q9H270 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS11Q9H270 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
VPS11Q9H270 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
VPS11Q9H270 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS11Q9H270 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.68■□□□□ 0.9
VPS11Q9H270 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS11Q9H270 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.68■□□□□ 0.9
VPS11Q9H270 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS11Q9H270 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
VPS11Q9H270 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 AC008406.3-201ENST00000620001 1374 ntBASIC20.68■□□□□ 0.9
VPS11Q9H270 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VPS11Q9H270 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.68■□□□□ 0.9
VPS11Q9H270 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS11Q9H270 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS11Q9H270 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS11Q9H270 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS11Q9H270 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS11Q9H270 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS11Q9H270 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS11Q9H270 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS11Q9H270 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS11Q9H270 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS11Q9H270 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS11Q9H270 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
VPS11Q9H270 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.67■□□□□ 0.9
VPS11Q9H270 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS11Q9H270 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VPS11Q9H270 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.67■□□□□ 0.9
VPS11Q9H270 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS11Q9H270 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.67■□□□□ 0.9
VPS11Q9H270 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms