Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.43■■□□□ 1.18
CDT1Q9H211 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
CDT1Q9H211 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CDT1Q9H211 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDT1Q9H211 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.42■■□□□ 1.18
CDT1Q9H211 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.42■■□□□ 1.18
CDT1Q9H211 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
CDT1Q9H211 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDT1Q9H211 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDT1Q9H211 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.42■■□□□ 1.18
CDT1Q9H211 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.42■■□□□ 1.18
CDT1Q9H211 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.42■■□□□ 1.18
CDT1Q9H211 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.42■■□□□ 1.18
CDT1Q9H211 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.42■■□□□ 1.18
CDT1Q9H211 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDT1Q9H211 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDT1Q9H211 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDT1Q9H211 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.41■■□□□ 1.18
CDT1Q9H211 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.41■■□□□ 1.18
CDT1Q9H211 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDT1Q9H211 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDT1Q9H211 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDT1Q9H211 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.41■■□□□ 1.18
CDT1Q9H211 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CDT1Q9H211 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.41■■□□□ 1.18
CDT1Q9H211 AC011484.1-201ENST00000377652 1995 ntBASIC22.41■■□□□ 1.18
CDT1Q9H211 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDT1Q9H211 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.41■■□□□ 1.18
CDT1Q9H211 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDT1Q9H211 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.4■■□□□ 1.18
CDT1Q9H211 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.4■■□□□ 1.18
CDT1Q9H211 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
CDT1Q9H211 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.4■■□□□ 1.18
CDT1Q9H211 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
CDT1Q9H211 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.4■■□□□ 1.18
CDT1Q9H211 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDT1Q9H211 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
CDT1Q9H211 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.4■■□□□ 1.18
CDT1Q9H211 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CDT1Q9H211 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.39■■□□□ 1.18
CDT1Q9H211 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CDT1Q9H211 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CDT1Q9H211 LSM12P1-201ENST00000411836 588 ntBASIC22.39■■□□□ 1.17
CDT1Q9H211 DUSP5P2-201ENST00000426873 1033 ntBASIC22.39■■□□□ 1.17
CDT1Q9H211 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.39■■□□□ 1.17
CDT1Q9H211 AC091874.3-201ENST00000512672 1195 ntBASIC22.39■■□□□ 1.17
CDT1Q9H211 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.39■■□□□ 1.17
CDT1Q9H211 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.39■■□□□ 1.17
CDT1Q9H211 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDT1Q9H211 MYC-209ENST00000641252 345 ntBASIC22.39■■□□□ 1.17
CDT1Q9H211 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CDT1Q9H211 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.39■■□□□ 1.17
CDT1Q9H211 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.39■■□□□ 1.17
CDT1Q9H211 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
CDT1Q9H211 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CDT1Q9H211 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CDT1Q9H211 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.39■■□□□ 1.17
CDT1Q9H211 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.38■■□□□ 1.17
CDT1Q9H211 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDT1Q9H211 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDT1Q9H211 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDT1Q9H211 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CDT1Q9H211 KRT18P68-201ENST00000392293 1000 ntBASIC22.38■■□□□ 1.17
CDT1Q9H211 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CDT1Q9H211 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDT1Q9H211 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.38■■□□□ 1.17
CDT1Q9H211 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.38■■□□□ 1.17
CDT1Q9H211 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.38■■□□□ 1.17
CDT1Q9H211 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.38■■□□□ 1.17
CDT1Q9H211 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CDT1Q9H211 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CDT1Q9H211 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDT1Q9H211 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CDT1Q9H211 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDT1Q9H211 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.37■■□□□ 1.17
CDT1Q9H211 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDT1Q9H211 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDT1Q9H211 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CDT1Q9H211 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.37■■□□□ 1.17
CDT1Q9H211 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
CDT1Q9H211 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.37■■□□□ 1.17
CDT1Q9H211 KRT18P6-201ENST00000555540 1265 ntBASIC22.37■■□□□ 1.17
CDT1Q9H211 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
CDT1Q9H211 AC083880.1-201ENST00000608266 535 ntBASIC22.37■■□□□ 1.17
CDT1Q9H211 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms