Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 AC008175.2-201ENST00000612840 297 ntBASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHACTR1Q9C0D0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.89■□□□□ 0.94
PHACTR1Q9C0D0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.89■□□□□ 0.94
PHACTR1Q9C0D0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.89■□□□□ 0.94
PHACTR1Q9C0D0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PHACTR1Q9C0D0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.89■□□□□ 0.94
PHACTR1Q9C0D0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PHACTR1Q9C0D0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.89■□□□□ 0.93
PHACTR1Q9C0D0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 RASA4CP-201ENST00000424092 1398 ntBASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 AC007952.6-201ENST00000573168 2673 ntBASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 AC003957.1-201ENST00000625108 2673 ntBASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHACTR1Q9C0D0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 RARRES2P11-201ENST00000635158 484 ntBASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 KRT16P2-201ENST00000414673 1423 ntBASIC20.87■□□□□ 0.93
PHACTR1Q9C0D0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 AC106739.1-201ENST00000617035 715 ntBASIC20.86■□□□□ 0.93
PHACTR1Q9C0D0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PHACTR1Q9C0D0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms