Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMD4Q96H15 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMD4Q96H15 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMD4Q96H15 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMD4Q96H15 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TIMD4Q96H15 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.32■□□□□ 0.36
TIMD4Q96H15 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMD4Q96H15 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TIMD4Q96H15 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.32■□□□□ 0.36
TIMD4Q96H15 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 AC133561.1-201ENST00000568600 2415 ntBASIC17.31■□□□□ 0.36
TIMD4Q96H15 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 AL589743.5-201ENST00000616611 1050 ntBASIC17.31■□□□□ 0.36
TIMD4Q96H15 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TIMD4Q96H15 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TIMD4Q96H15 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMD4Q96H15 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TIMD4Q96H15 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TIMD4Q96H15 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
TIMD4Q96H15 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 PGM5P4-201ENST00000421970 445 ntBASIC17.3■□□□□ 0.36
TIMD4Q96H15 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TIMD4Q96H15 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TIMD4Q96H15 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.3■□□□□ 0.36
TIMD4Q96H15 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.3■□□□□ 0.36
TIMD4Q96H15 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TIMD4Q96H15 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMD4Q96H15 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMD4Q96H15 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMD4Q96H15 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMD4Q96H15 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMD4Q96H15 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMD4Q96H15 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMD4Q96H15 CYP2T3P-201ENST00000601990 817 ntBASIC17.29■□□□□ 0.36
TIMD4Q96H15 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMD4Q96H15 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMD4Q96H15 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMD4Q96H15 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.29■□□□□ 0.36
TIMD4Q96H15 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMD4Q96H15 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMD4Q96H15 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMD4Q96H15 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.28■□□□□ 0.36
TIMD4Q96H15 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.28■□□□□ 0.36
TIMD4Q96H15 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TIMD4Q96H15 FBXW4P1-201ENST00000426721 2239 ntBASIC17.28■□□□□ 0.36
TIMD4Q96H15 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMD4Q96H15 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMD4Q96H15 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.28■□□□□ 0.36
TIMD4Q96H15 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMD4Q96H15 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMD4Q96H15 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TIMD4Q96H15 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms