Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
NMD3Q96D46 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NMD3Q96D46 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.43■□□□□ 0.7
NMD3Q96D46 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
NMD3Q96D46 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NMD3Q96D46 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NMD3Q96D46 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.42■□□□□ 0.7
NMD3Q96D46 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.42■□□□□ 0.7
NMD3Q96D46 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.42■□□□□ 0.7
NMD3Q96D46 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NMD3Q96D46 AL031602.1-201ENST00000633169 911 ntBASIC19.42■□□□□ 0.7
NMD3Q96D46 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
NMD3Q96D46 AP000974.1-201ENST00000623909 2387 ntBASIC19.42■□□□□ 0.7
NMD3Q96D46 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NMD3Q96D46 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NMD3Q96D46 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.41■□□□□ 0.7
NMD3Q96D46 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.41■□□□□ 0.7
NMD3Q96D46 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NMD3Q96D46 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.41■□□□□ 0.7
NMD3Q96D46 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.41■□□□□ 0.7
NMD3Q96D46 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
NMD3Q96D46 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.41■□□□□ 0.7
NMD3Q96D46 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.41■□□□□ 0.7
NMD3Q96D46 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NMD3Q96D46 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.41■□□□□ 0.7
NMD3Q96D46 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NMD3Q96D46 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NMD3Q96D46 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NMD3Q96D46 AC116562.4-201ENST00000641316 2276 ntBASIC19.4■□□□□ 0.7
NMD3Q96D46 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.4■□□□□ 0.7
NMD3Q96D46 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NMD3Q96D46 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.4■□□□□ 0.7
NMD3Q96D46 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NMD3Q96D46 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NMD3Q96D46 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NMD3Q96D46 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NMD3Q96D46 SERBP1P1-201ENST00000396021 1160 ntBASIC19.4■□□□□ 0.7
NMD3Q96D46 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.4■□□□□ 0.7
NMD3Q96D46 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NMD3Q96D46 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NMD3Q96D46 OXCT2P1-201ENST00000447263 1535 ntBASIC19.4■□□□□ 0.7
NMD3Q96D46 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NMD3Q96D46 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NMD3Q96D46 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
NMD3Q96D46 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NMD3Q96D46 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NMD3Q96D46 TNXA-203ENST00000507684 2038 ntBASIC19.39■□□□□ 0.69
NMD3Q96D46 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NMD3Q96D46 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NMD3Q96D46 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.39■□□□□ 0.69
NMD3Q96D46 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NMD3Q96D46 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.39■□□□□ 0.69
NMD3Q96D46 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NMD3Q96D46 AL138724.1-201ENST00000606771 1088 ntBASIC19.39■□□□□ 0.69
NMD3Q96D46 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NMD3Q96D46 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NMD3Q96D46 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NMD3Q96D46 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NMD3Q96D46 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NMD3Q96D46 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.39■□□□□ 0.69
NMD3Q96D46 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NMD3Q96D46 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.39■□□□□ 0.69
NMD3Q96D46 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NMD3Q96D46 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NMD3Q96D46 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NMD3Q96D46 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NMD3Q96D46 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.38■□□□□ 0.69
NMD3Q96D46 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NMD3Q96D46 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NMD3Q96D46 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.38■□□□□ 0.69
NMD3Q96D46 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NMD3Q96D46 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NMD3Q96D46 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms