Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 AC008406.3-201ENST00000620001 1374 ntBASIC16.8■□□□□ 0.28
LSM10Q969L4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.8■□□□□ 0.28
LSM10Q969L4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LSM10Q969L4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LSM10Q969L4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LSM10Q969L4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.79■□□□□ 0.28
LSM10Q969L4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LSM10Q969L4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.79■□□□□ 0.28
LSM10Q969L4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.79■□□□□ 0.28
LSM10Q969L4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
LSM10Q969L4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.79■□□□□ 0.28
LSM10Q969L4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.79■□□□□ 0.28
LSM10Q969L4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LSM10Q969L4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 AC099778.1-201ENST00000568593 1911 ntBASIC16.79■□□□□ 0.28
LSM10Q969L4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.79■□□□□ 0.28
LSM10Q969L4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.79■□□□□ 0.28
LSM10Q969L4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.79■□□□□ 0.28
LSM10Q969L4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
LSM10Q969L4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LSM10Q969L4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LSM10Q969L4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSM10Q969L4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSM10Q969L4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSM10Q969L4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSM10Q969L4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSM10Q969L4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LSM10Q969L4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
LSM10Q969L4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSM10Q969L4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.78■□□□□ 0.28
LSM10Q969L4 AC027682.1-201ENST00000562846 899 ntBASIC16.78■□□□□ 0.28
LSM10Q969L4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.78■□□□□ 0.28
LSM10Q969L4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.78■□□□□ 0.28
LSM10Q969L4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.78■□□□□ 0.28
LSM10Q969L4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.78■□□□□ 0.28
LSM10Q969L4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSM10Q969L4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LSM10Q969L4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.78■□□□□ 0.28
LSM10Q969L4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
LSM10Q969L4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSM10Q969L4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.78■□□□□ 0.28
LSM10Q969L4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LSM10Q969L4 PCDHAC2-203ENST00000615316 3011 ntBASIC16.78■□□□□ 0.28
LSM10Q969L4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSM10Q969L4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.77■□□□□ 0.28
LSM10Q969L4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSM10Q969L4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
LSM10Q969L4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSM10Q969L4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSM10Q969L4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LSM10Q969L4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.77■□□□□ 0.28
LSM10Q969L4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.77■□□□□ 0.28
LSM10Q969L4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.77■□□□□ 0.28
LSM10Q969L4 AC008764.7-201ENST00000593779 1081 ntBASIC16.77■□□□□ 0.28
LSM10Q969L4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.77■□□□□ 0.28
LSM10Q969L4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LSM10Q969L4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LSM10Q969L4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.77■□□□□ 0.27
LSM10Q969L4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSM10Q969L4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
LSM10Q969L4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSM10Q969L4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LSM10Q969L4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LSM10Q969L4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM10Q969L4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.76■□□□□ 0.27
LSM10Q969L4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM10Q969L4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM10Q969L4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
LSM10Q969L4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM10Q969L4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LSM10Q969L4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.76■□□□□ 0.27
LSM10Q969L4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LSM10Q969L4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LSM10Q969L4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.76■□□□□ 0.27
LSM10Q969L4 AC099791.1-201ENST00000416440 715 ntBASIC16.76■□□□□ 0.27
LSM10Q969L4 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.76■□□□□ 0.27
LSM10Q969L4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.76■□□□□ 0.27
LSM10Q969L4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LSM10Q969L4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LSM10Q969L4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LSM10Q969L4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms