Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB1Q8WWH5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 AL356740.2-201ENST00000601559 647 ntBASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB1Q8WWH5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 AL138724.1-201ENST00000606771 1088 ntBASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 AL162377.1-201ENST00000618844 1793 ntBASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRUB1Q8WWH5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 SRD5A1P1-201ENST00000442297 786 ntBASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRUB1Q8WWH5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 AC009299.2-201ENST00000482477 511 ntBASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRUB1Q8WWH5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRUB1Q8WWH5 AC004408.2-201ENST00000623613 2777 ntBASIC18.83■□□□□ 0.61
TRUB1Q8WWH5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.83■□□□□ 0.61
TRUB1Q8WWH5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.83■□□□□ 0.61
TRUB1Q8WWH5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.83■□□□□ 0.61
TRUB1Q8WWH5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.83■□□□□ 0.61
TRUB1Q8WWH5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRUB1Q8WWH5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.83■□□□□ 0.6
TRUB1Q8WWH5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRUB1Q8WWH5 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms