Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 CLDN5-201ENST00000403084 2357 ntBASIC18.75■□□□□ 0.59
RNF138Q8WVD3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 ID1-201ENST00000376105 1233 ntBASIC18.75■□□□□ 0.59
RNF138Q8WVD3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 AC142086.2-201ENST00000569753 217 ntBASIC18.75■□□□□ 0.59
RNF138Q8WVD3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.75■□□□□ 0.59
RNF138Q8WVD3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF138Q8WVD3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 AC006128.1-201ENST00000624704 1661 ntBASIC18.74■□□□□ 0.59
RNF138Q8WVD3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 MIR2861-201ENST00000636310 90 ntBASIC18.74■□□□□ 0.59
RNF138Q8WVD3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 MKRN4P-201ENST00000444706 1521 ntBASIC18.74■□□□□ 0.59
RNF138Q8WVD3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF138Q8WVD3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF138Q8WVD3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 HLA-L-209ENST00000420110 1011 ntBASIC18.72■□□□□ 0.59
RNF138Q8WVD3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 AL109923.1-201ENST00000618799 583 ntBASIC18.72■□□□□ 0.59
RNF138Q8WVD3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF138Q8WVD3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 MIPEPP3-201ENST00000412105 444 ntBASIC18.71■□□□□ 0.59
RNF138Q8WVD3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF138Q8WVD3 AC073210.2-201ENST00000430369 194 ntBASIC18.71■□□□□ 0.59
RNF138Q8WVD3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms