Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCER1Q8TC90 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.73■■■□□ 2.51
CCER1Q8TC90 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC30.73■■■□□ 2.51
CCER1Q8TC90 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCER1Q8TC90 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC30.73■■■□□ 2.51
CCER1Q8TC90 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.73■■■□□ 2.51
CCER1Q8TC90 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CCER1Q8TC90 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC30.73■■■□□ 2.51
CCER1Q8TC90 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC30.73■■■□□ 2.51
CCER1Q8TC90 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC30.72■■■□□ 2.51
CCER1Q8TC90 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCER1Q8TC90 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCER1Q8TC90 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
CCER1Q8TC90 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC30.72■■■□□ 2.51
CCER1Q8TC90 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCER1Q8TC90 NT5C3AP1-201ENST00000394500 1012 ntBASIC30.72■■■□□ 2.51
CCER1Q8TC90 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC30.72■■■□□ 2.51
CCER1Q8TC90 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC30.72■■■□□ 2.51
CCER1Q8TC90 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCER1Q8TC90 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCER1Q8TC90 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC30.72■■■□□ 2.51
CCER1Q8TC90 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CCER1Q8TC90 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCER1Q8TC90 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC30.71■■■□□ 2.51
CCER1Q8TC90 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
CCER1Q8TC90 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCER1Q8TC90 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC30.71■■■□□ 2.51
CCER1Q8TC90 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCER1Q8TC90 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCER1Q8TC90 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCER1Q8TC90 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
CCER1Q8TC90 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCER1Q8TC90 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCER1Q8TC90 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCER1Q8TC90 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCER1Q8TC90 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCER1Q8TC90 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CCER1Q8TC90 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
CCER1Q8TC90 SUDS3P1-201ENST00000505831 966 ntBASIC30.7■■■□□ 2.51
CCER1Q8TC90 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CCER1Q8TC90 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCER1Q8TC90 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCER1Q8TC90 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CCER1Q8TC90 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCER1Q8TC90 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC30.69■■■□□ 2.5
CCER1Q8TC90 MIR6084-201ENST00000622012 110 ntBASIC30.69■■■□□ 2.5
CCER1Q8TC90 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCER1Q8TC90 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCER1Q8TC90 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCER1Q8TC90 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCER1Q8TC90 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC30.68■■■□□ 2.5
CCER1Q8TC90 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCER1Q8TC90 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCER1Q8TC90 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCER1Q8TC90 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
CCER1Q8TC90 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCER1Q8TC90 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCER1Q8TC90 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCER1Q8TC90 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
CCER1Q8TC90 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCER1Q8TC90 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCER1Q8TC90 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC30.67■■■□□ 2.5
CCER1Q8TC90 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCER1Q8TC90 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCER1Q8TC90 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC30.67■■■□□ 2.5
CCER1Q8TC90 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC30.67■■■□□ 2.5
CCER1Q8TC90 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC30.67■■■□□ 2.5
CCER1Q8TC90 AL354811.1-201ENST00000610286 706 ntBASIC30.67■■■□□ 2.5
CCER1Q8TC90 CPT2-209ENST00000636935 803 ntTSL 5 BASIC30.67■■■□□ 2.5
CCER1Q8TC90 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC30.67■■■□□ 2.5
CCER1Q8TC90 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCER1Q8TC90 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CCER1Q8TC90 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC30.66■■■□□ 2.5
CCER1Q8TC90 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCER1Q8TC90 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC30.66■■■□□ 2.5
CCER1Q8TC90 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCER1Q8TC90 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCER1Q8TC90 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCER1Q8TC90 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CCER1Q8TC90 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.66■■■□□ 2.5
CCER1Q8TC90 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCER1Q8TC90 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCER1Q8TC90 AL162377.1-201ENST00000618844 1793 ntBASIC30.66■■■□□ 2.5
CCER1Q8TC90 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCER1Q8TC90 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCER1Q8TC90 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
CCER1Q8TC90 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCER1Q8TC90 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
CCER1Q8TC90 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCER1Q8TC90 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC30.65■■■□□ 2.5
CCER1Q8TC90 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCER1Q8TC90 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
CCER1Q8TC90 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.65■■■□□ 2.5
CCER1Q8TC90 MTURN-203ENST00000409688 843 ntTSL 2 BASIC30.65■■■□□ 2.5
CCER1Q8TC90 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.65■■■□□ 2.5
CCER1Q8TC90 AL121603.2-201ENST00000557373 2117 ntBASIC30.65■■■□□ 2.5
CCER1Q8TC90 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
CCER1Q8TC90 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCER1Q8TC90 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CCER1Q8TC90 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms