Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 CICP4-201ENST00000447359 2812 ntBASIC13.07□□□□□ -0.32
SVIPQ8NHG7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SVIPQ8NHG7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 ECEL1P1-201ENST00000373592 1742 ntBASIC13.06□□□□□ -0.32
SVIPQ8NHG7 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SVIPQ8NHG7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SVIPQ8NHG7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.04□□□□□ -0.32
SVIPQ8NHG7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 AC142381.3-201ENST00000568208 1670 ntBASIC13.04□□□□□ -0.32
SVIPQ8NHG7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SVIPQ8NHG7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SVIPQ8NHG7 AC092171.3-201ENST00000610122 2651 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms