Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS37AQ8NEZ2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VPS37AQ8NEZ2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS37AQ8NEZ2 AC079140.4-201ENST00000507448 529 ntBASIC19.62■□□□□ 0.73
VPS37AQ8NEZ2 AC142381.2-201ENST00000566120 298 ntBASIC19.62■□□□□ 0.73
VPS37AQ8NEZ2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS37AQ8NEZ2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS37AQ8NEZ2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
VPS37AQ8NEZ2 AC061975.6-201ENST00000579045 1553 ntBASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS37AQ8NEZ2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 KRT87P-202ENST00000534226 1464 ntBASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 AC073314.1-201ENST00000568729 2216 ntBASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 AC120498.10-201ENST00000621827 505 ntBASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS37AQ8NEZ2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 AC092667.1-201ENST00000434301 2586 ntBASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS37AQ8NEZ2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS37AQ8NEZ2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.58■□□□□ 0.73
VPS37AQ8NEZ2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS37AQ8NEZ2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS37AQ8NEZ2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
VPS37AQ8NEZ2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 FP700111.2-201ENST00000619190 1892 ntBASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS37AQ8NEZ2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 IRS3P-201ENST00000223076 1006 ntBASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
VPS37AQ8NEZ2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms