Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.13■□□□□ 0.33
C11orf42Q8N5U0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 AC243732.1-201ENST00000612648 864 ntBASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 RBM17P2-201ENST00000616397 1405 ntBASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 AC007375.3-201ENST00000600936 2314 ntBASIC17.12■□□□□ 0.33
C11orf42Q8N5U0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 AL391422.3-201ENST00000603791 2761 ntBASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 AC010536.3-201ENST00000620306 533 ntBASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf42Q8N5U0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 TERF1P5-201ENST00000477545 1207 ntBASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 AC080038.1-201ENST00000611274 1154 ntBASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.1■□□□□ 0.33
C11orf42Q8N5U0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 CDCA4P2-201ENST00000441182 718 ntBASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 RAP2CP1-201ENST00000605103 478 ntBASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf42Q8N5U0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms