Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATPAF2Q8N5M1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ATPAF2Q8N5M1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATPAF2Q8N5M1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATPAF2Q8N5M1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 AL137784.2-201ENST00000607332 1000 ntBASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 AC092437.1-201ENST00000624794 1048 ntBASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.13■□□□□ 0.97
ATPAF2Q8N5M1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATPAF2Q8N5M1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 AC007322.3-201ENST00000426526 701 ntBASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 CDV3P1-201ENST00000471403 739 ntBASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 AC007322.4-201ENST00000509611 723 ntBASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATPAF2Q8N5M1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 DUX4L16-201ENST00000555130 1264 ntBASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.1■□□□□ 0.97
ATPAF2Q8N5M1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 AL591742.1-201ENST00000604433 565 ntBASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATPAF2Q8N5M1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATPAF2Q8N5M1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATPAF2Q8N5M1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms