Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RP1L1Q8IWN7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RP1L1Q8IWN7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.66■□□□□ 0.58
RP1L1Q8IWN7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RP1L1Q8IWN7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RP1L1Q8IWN7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RP1L1Q8IWN7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RP1L1Q8IWN7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RP1L1Q8IWN7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 RN7SL471P-201ENST00000580476 299 ntBASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 AC092368.3-202ENST00000574180 1591 ntBASIC18.65■□□□□ 0.58
RP1L1Q8IWN7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RP1L1Q8IWN7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RP1L1Q8IWN7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.64■□□□□ 0.58
RP1L1Q8IWN7 AC245052.3-201ENST00000450182 901 ntBASIC18.64■□□□□ 0.58
RP1L1Q8IWN7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RP1L1Q8IWN7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.64■□□□□ 0.58
RP1L1Q8IWN7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
RP1L1Q8IWN7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RP1L1Q8IWN7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RP1L1Q8IWN7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
RP1L1Q8IWN7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RP1L1Q8IWN7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RP1L1Q8IWN7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RP1L1Q8IWN7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RP1L1Q8IWN7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.64■□□□□ 0.57
RP1L1Q8IWN7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.64■□□□□ 0.57
RP1L1Q8IWN7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 AC012306.2-201ENST00000609350 630 ntBASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 AC026471.6-201ENST00000622954 1905 ntBASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RP1L1Q8IWN7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 TMPOP1-202ENST00000424642 1267 ntBASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 RARRES2P10-201ENST00000564312 460 ntBASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 RPS2P55-201ENST00000397318 883 ntBASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 AC107956.1-201ENST00000494359 873 ntBASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms