Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 AL032819.2-201ENST00000624543 2162 ntBASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CROCCP3Q8IVE0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 AC079598.2-202ENST00000546624 1451 ntBASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 AC093503.3-201ENST00000624917 2352 ntBASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 NOC2LP1-202ENST00000452600 2235 ntBASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CROCCP3Q8IVE0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CROCCP3Q8IVE0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.64■□□□□ 0.57
CROCCP3Q8IVE0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CROCCP3Q8IVE0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CROCCP3Q8IVE0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CROCCP3Q8IVE0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CROCCP3Q8IVE0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CROCCP3Q8IVE0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.64■□□□□ 0.57
CROCCP3Q8IVE0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CROCCP3Q8IVE0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CROCCP3Q8IVE0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CROCCP3Q8IVE0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.63■□□□□ 0.57
CROCCP3Q8IVE0 AC099778.1-201ENST00000568593 1911 ntBASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CROCCP3Q8IVE0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms