Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL23A1Q86Y22 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.18■■□□□ 1.78
COL23A1Q86Y22 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC26.18■■□□□ 1.78
COL23A1Q86Y22 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL23A1Q86Y22 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL23A1Q86Y22 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.17■■□□□ 1.78
COL23A1Q86Y22 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL23A1Q86Y22 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL23A1Q86Y22 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.17■■□□□ 1.78
COL23A1Q86Y22 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.17■■□□□ 1.78
COL23A1Q86Y22 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
COL23A1Q86Y22 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL23A1Q86Y22 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.17■■□□□ 1.78
COL23A1Q86Y22 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL23A1Q86Y22 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL23A1Q86Y22 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
COL23A1Q86Y22 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL23A1Q86Y22 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC26.16■■□□□ 1.78
COL23A1Q86Y22 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
COL23A1Q86Y22 MIR6786-201ENST00000616843 113 ntBASIC26.16■■□□□ 1.78
COL23A1Q86Y22 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL23A1Q86Y22 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.16■■□□□ 1.78
COL23A1Q86Y22 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL23A1Q86Y22 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL23A1Q86Y22 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL23A1Q86Y22 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.14■■□□□ 1.78
COL23A1Q86Y22 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
COL23A1Q86Y22 AC026471.6-201ENST00000622954 1905 ntBASIC26.14■■□□□ 1.78
COL23A1Q86Y22 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL23A1Q86Y22 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL23A1Q86Y22 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
COL23A1Q86Y22 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.14■■□□□ 1.78
COL23A1Q86Y22 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.14■■□□□ 1.78
COL23A1Q86Y22 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC26.14■■□□□ 1.78
COL23A1Q86Y22 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.14■■□□□ 1.78
COL23A1Q86Y22 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC26.14■■□□□ 1.78
COL23A1Q86Y22 AC145285.6-201ENST00000604632 637 ntBASIC26.14■■□□□ 1.78
COL23A1Q86Y22 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.77
COL23A1Q86Y22 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL23A1Q86Y22 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
COL23A1Q86Y22 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.14■■□□□ 1.77
COL23A1Q86Y22 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.14■■□□□ 1.77
COL23A1Q86Y22 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
COL23A1Q86Y22 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 AC005521.1-201ENST00000393351 872 ntBASIC26.13■■□□□ 1.77
COL23A1Q86Y22 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 AL355355.2-201ENST00000442321 338 ntBASIC26.13■■□□□ 1.77
COL23A1Q86Y22 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 AC093323.1-202ENST00000635031 2045 ntBASIC26.13■■□□□ 1.77
COL23A1Q86Y22 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL23A1Q86Y22 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 RNF146-204ENST00000476956 884 ntTSL 2 BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 RMI2-205ENST00000576027 818 ntTSL 2 BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 AC005363.2-201ENST00000618631 242 ntBASIC26.12■■□□□ 1.77
COL23A1Q86Y22 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 KRT8P9-201ENST00000558927 1449 ntBASIC26.12■■□□□ 1.77
COL23A1Q86Y22 AC087633.2-202ENST00000565166 1439 ntBASIC26.12■■□□□ 1.77
COL23A1Q86Y22 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL23A1Q86Y22 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL23A1Q86Y22 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms