Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.66■□□□□ 0.9
RAPH1Q70E73 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
RAPH1Q70E73 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 AC073314.1-201ENST00000568729 2216 ntBASIC20.66■□□□□ 0.9
RAPH1Q70E73 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPH1Q70E73 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.65■□□□□ 0.9
RAPH1Q70E73 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPH1Q70E73 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPH1Q70E73 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RAPH1Q70E73 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RAPH1Q70E73 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.65■□□□□ 0.9
RAPH1Q70E73 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPH1Q70E73 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPH1Q70E73 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPH1Q70E73 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAPH1Q70E73 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.65■□□□□ 0.9
RAPH1Q70E73 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.65■□□□□ 0.9
RAPH1Q70E73 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.65■□□□□ 0.9
RAPH1Q70E73 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.65■□□□□ 0.9
RAPH1Q70E73 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAPH1Q70E73 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPH1Q70E73 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAPH1Q70E73 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAPH1Q70E73 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAPH1Q70E73 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.64■□□□□ 0.9
RAPH1Q70E73 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAPH1Q70E73 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAPH1Q70E73 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAPH1Q70E73 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RAPH1Q70E73 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.64■□□□□ 0.89
RAPH1Q70E73 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAPH1Q70E73 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.64■□□□□ 0.89
RAPH1Q70E73 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.64■□□□□ 0.89
RAPH1Q70E73 AC012414.1-201ENST00000556676 535 ntBASIC20.64■□□□□ 0.89
RAPH1Q70E73 AC053503.5-201ENST00000601508 636 ntBASIC20.64■□□□□ 0.89
RAPH1Q70E73 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.64■□□□□ 0.89
RAPH1Q70E73 AP005212.1-201ENST00000581547 1997 ntBASIC20.64■□□□□ 0.89
RAPH1Q70E73 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAPH1Q70E73 GABARAPL3-202ENST00000624044 1851 ntBASIC20.64■□□□□ 0.89
RAPH1Q70E73 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAPH1Q70E73 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAPH1Q70E73 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAPH1Q70E73 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAPH1Q70E73 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.63■□□□□ 0.89
RAPH1Q70E73 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAPH1Q70E73 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
RAPH1Q70E73 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RAPH1Q70E73 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.63■□□□□ 0.89
RAPH1Q70E73 AL031432.3-201ENST00000607698 485 ntBASIC20.63■□□□□ 0.89
RAPH1Q70E73 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RAPH1Q70E73 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.63■□□□□ 0.89
RAPH1Q70E73 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAPH1Q70E73 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAPH1Q70E73 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAPH1Q70E73 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
RAPH1Q70E73 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RAPH1Q70E73 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RAPH1Q70E73 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.62■□□□□ 0.89
RAPH1Q70E73 EEF1DP3-203ENST00000566025 782 ntBASIC20.62■□□□□ 0.89
RAPH1Q70E73 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.62■□□□□ 0.89
RAPH1Q70E73 AL354811.1-201ENST00000610286 706 ntBASIC20.62■□□□□ 0.89
RAPH1Q70E73 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 AP004607.4-201ENST00000530158 1459 ntBASIC20.62■□□□□ 0.89
RAPH1Q70E73 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.62■□□□□ 0.89
RAPH1Q70E73 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAPH1Q70E73 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAPH1Q70E73 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAPH1Q70E73 AC061975.6-201ENST00000579045 1553 ntBASIC20.61■□□□□ 0.89
RAPH1Q70E73 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
RAPH1Q70E73 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.61■□□□□ 0.89
RAPH1Q70E73 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAPH1Q70E73 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.61■□□□□ 0.89
RAPH1Q70E73 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.61■□□□□ 0.89
RAPH1Q70E73 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.61■□□□□ 0.89
RAPH1Q70E73 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
RAPH1Q70E73 AC007225.1-201ENST00000566331 1836 ntBASIC20.61■□□□□ 0.89
RAPH1Q70E73 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.61■□□□□ 0.89
RAPH1Q70E73 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAPH1Q70E73 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RAPH1Q70E73 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAPH1Q70E73 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms