Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 MIR4767-201ENST00000582827 78 ntBASIC19.77■□□□□ 0.76
RNF220Q5VTB9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RNF220Q5VTB9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF220Q5VTB9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 AP000974.1-201ENST00000623909 2387 ntBASIC19.76■□□□□ 0.75
RNF220Q5VTB9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF220Q5VTB9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 NEFHP1-201ENST00000412845 2629 ntBASIC19.75■□□□□ 0.75
RNF220Q5VTB9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF220Q5VTB9 TNXA-203ENST00000507684 2038 ntBASIC19.75■□□□□ 0.75
RNF220Q5VTB9 AC005082.1-201ENST00000413042 2259 ntBASIC19.74■□□□□ 0.75
RNF220Q5VTB9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 AL136162.1-201ENST00000607711 1078 ntBASIC19.74■□□□□ 0.75
RNF220Q5VTB9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RNF220Q5VTB9 AC135279.3-201ENST00000610945 1311 ntBASIC19.74■□□□□ 0.75
RNF220Q5VTB9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 AC024257.2-201ENST00000549699 147 ntBASIC19.73■□□□□ 0.75
RNF220Q5VTB9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF220Q5VTB9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms