Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL353807.1-201ENST00000427475 662 ntBASIC18.12■□□□□ 0.49
LRRK2Q5S007 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.12■□□□□ 0.49
LRRK2Q5S007 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRK2Q5S007 AC105020.6-201ENST00000621523 1217 ntBASIC18.12■□□□□ 0.49
LRRK2Q5S007 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRK2Q5S007 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRK2Q5S007 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRK2Q5S007 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRK2Q5S007 AL390955.1-201ENST00000428694 934 ntBASIC18.12■□□□□ 0.49
LRRK2Q5S007 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRK2Q5S007 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRK2Q5S007 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 AC245052.3-201ENST00000450182 901 ntBASIC18.11■□□□□ 0.49
LRRK2Q5S007 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRK2Q5S007 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRK2Q5S007 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRK2Q5S007 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRK2Q5S007 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 AL137013.1-201ENST00000432946 1228 ntBASIC18.11■□□□□ 0.49
LRRK2Q5S007 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 AC006557.6-201ENST00000623071 864 ntBASIC18.11■□□□□ 0.49
LRRK2Q5S007 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRK2Q5S007 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 AL450487.1-201ENST00000426799 995 ntBASIC18.1■□□□□ 0.49
LRRK2Q5S007 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 MYC-208ENST00000641036 567 ntBASIC18.1■□□□□ 0.49
LRRK2Q5S007 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRK2Q5S007 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRK2Q5S007 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LRRK2Q5S007 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRK2Q5S007 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRK2Q5S007 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRK2Q5S007 GPALPP1-207ENST00000611650 899 ntBASIC18.09■□□□□ 0.49
LRRK2Q5S007 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRK2Q5S007 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRK2Q5S007 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRK2Q5S007 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRK2Q5S007 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRK2Q5S007 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.09■□□□□ 0.49
LRRK2Q5S007 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.09■□□□□ 0.49
LRRK2Q5S007 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRK2Q5S007 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRK2Q5S007 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
LRRK2Q5S007 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRK2Q5S007 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRK2Q5S007 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.08■□□□□ 0.49
LRRK2Q5S007 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRK2Q5S007 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRK2Q5S007 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRK2Q5S007 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LRRK2Q5S007 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRK2Q5S007 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRK2Q5S007 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
LRRK2Q5S007 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRK2Q5S007 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRK2Q5S007 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRK2Q5S007 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRK2Q5S007 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRK2Q5S007 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRK2Q5S007 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRK2Q5S007 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LRRK2Q5S007 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRK2Q5S007 FITM1-202ENST00000559294 800 ntBASIC18.08■□□□□ 0.48
LRRK2Q5S007 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRK2Q5S007 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRK2Q5S007 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRK2Q5S007 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRK2Q5S007 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRK2Q5S007 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRK2Q5S007 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRK2Q5S007 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRK2Q5S007 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRK2Q5S007 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRK2Q5S007 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRK2Q5S007 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms