Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CBWD6Q4V339 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD6Q4V339 FP700111.2-201ENST00000619190 1892 ntBASIC22.32■■□□□ 1.16
CBWD6Q4V339 LINC01006-201ENST00000333319 2292 ntBASIC22.32■■□□□ 1.16
CBWD6Q4V339 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD6Q4V339 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD6Q4V339 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CBWD6Q4V339 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 AC092667.1-201ENST00000434301 2586 ntBASIC22.31■■□□□ 1.16
CBWD6Q4V339 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD6Q4V339 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD6Q4V339 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD6Q4V339 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 MFSD11-216ENST00000590393 1141 ntBASIC22.31■■□□□ 1.16
CBWD6Q4V339 AC010536.3-201ENST00000620306 533 ntBASIC22.31■■□□□ 1.16
CBWD6Q4V339 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CBWD6Q4V339 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CBWD6Q4V339 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CBWD6Q4V339 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD6Q4V339 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD6Q4V339 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD6Q4V339 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.3■■□□□ 1.16
CBWD6Q4V339 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CBWD6Q4V339 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD6Q4V339 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.3■■□□□ 1.16
CBWD6Q4V339 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.3■■□□□ 1.16
CBWD6Q4V339 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.3■■□□□ 1.16
CBWD6Q4V339 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD6Q4V339 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CBWD6Q4V339 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD6Q4V339 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD6Q4V339 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CBWD6Q4V339 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD6Q4V339 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD6Q4V339 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD6Q4V339 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CBWD6Q4V339 TERF1P5-201ENST00000477545 1207 ntBASIC22.29■■□□□ 1.16
CBWD6Q4V339 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD6Q4V339 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD6Q4V339 AC027702.1-201ENST00000563810 1770 ntBASIC22.29■■□□□ 1.16
CBWD6Q4V339 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CBWD6Q4V339 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CBWD6Q4V339 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CBWD6Q4V339 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.29■■□□□ 1.16
CBWD6Q4V339 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.29■■□□□ 1.16
CBWD6Q4V339 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CBWD6Q4V339 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.28■■□□□ 1.16
CBWD6Q4V339 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD6Q4V339 AL121603.2-201ENST00000557373 2117 ntBASIC22.28■■□□□ 1.16
CBWD6Q4V339 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD6Q4V339 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD6Q4V339 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.28■■□□□ 1.16
CBWD6Q4V339 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.28■■□□□ 1.16
CBWD6Q4V339 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD6Q4V339 AC016769.1-201ENST00000409132 1010 ntBASIC22.28■■□□□ 1.16
CBWD6Q4V339 KRT18P11-201ENST00000435214 1283 ntBASIC22.28■■□□□ 1.16
CBWD6Q4V339 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CBWD6Q4V339 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.28■■□□□ 1.16
CBWD6Q4V339 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD6Q4V339 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CBWD6Q4V339 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CBWD6Q4V339 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
CBWD6Q4V339 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD6Q4V339 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD6Q4V339 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
CBWD6Q4V339 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CBWD6Q4V339 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.27■■□□□ 1.16
CBWD6Q4V339 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
CBWD6Q4V339 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.27■■□□□ 1.16
CBWD6Q4V339 AP005212.1-201ENST00000581547 1997 ntBASIC22.27■■□□□ 1.16
CBWD6Q4V339 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.27■■□□□ 1.16
CBWD6Q4V339 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
CBWD6Q4V339 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 AC022517.1-201ENST00000592429 346 ntBASIC22.27■■□□□ 1.16
CBWD6Q4V339 AC011767.1-201ENST00000617410 1153 ntBASIC22.27■■□□□ 1.16
CBWD6Q4V339 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CBWD6Q4V339 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
CBWD6Q4V339 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CBWD6Q4V339 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CBWD6Q4V339 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.26■■□□□ 1.15
CBWD6Q4V339 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.26■■□□□ 1.15
CBWD6Q4V339 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.26■■□□□ 1.15
CBWD6Q4V339 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms