Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH17Q12864 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDH17Q12864 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH17Q12864 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH17Q12864 AC073314.1-201ENST00000568729 2216 ntBASIC20.82■□□□□ 0.92
CDH17Q12864 AC116050.2-201ENST00000612102 1779 ntBASIC20.82■□□□□ 0.92
CDH17Q12864 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDH17Q12864 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH17Q12864 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH17Q12864 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CDH17Q12864 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH17Q12864 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.82■□□□□ 0.92
CDH17Q12864 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH17Q12864 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.82■□□□□ 0.92
CDH17Q12864 AC243732.1-201ENST00000612648 864 ntBASIC20.82■□□□□ 0.92
CDH17Q12864 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.82■□□□□ 0.92
CDH17Q12864 MIR6821-201ENST00000617625 74 ntBASIC20.82■□□□□ 0.92
CDH17Q12864 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH17Q12864 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.82■□□□□ 0.92
CDH17Q12864 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH17Q12864 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH17Q12864 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH17Q12864 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH17Q12864 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH17Q12864 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.81■□□□□ 0.92
CDH17Q12864 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH17Q12864 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CDH17Q12864 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH17Q12864 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.81■□□□□ 0.92
CDH17Q12864 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.81■□□□□ 0.92
CDH17Q12864 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH17Q12864 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH17Q12864 AC019069.1-201ENST00000610008 1333 ntBASIC20.8■□□□□ 0.92
CDH17Q12864 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH17Q12864 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH17Q12864 RBM17P2-201ENST00000616397 1405 ntBASIC20.8■□□□□ 0.92
CDH17Q12864 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDH17Q12864 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH17Q12864 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH17Q12864 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH17Q12864 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.8■□□□□ 0.92
CDH17Q12864 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH17Q12864 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH17Q12864 NTF6G-201ENST00000591094 616 ntBASIC20.8■□□□□ 0.92
CDH17Q12864 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDH17Q12864 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDH17Q12864 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH17Q12864 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH17Q12864 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDH17Q12864 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
CDH17Q12864 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH17Q12864 AC027702.1-201ENST00000563810 1770 ntBASIC20.8■□□□□ 0.92
CDH17Q12864 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH17Q12864 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH17Q12864 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH17Q12864 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH17Q12864 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDH17Q12864 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDH17Q12864 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.79■□□□□ 0.92
CDH17Q12864 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.79■□□□□ 0.92
CDH17Q12864 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH17Q12864 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH17Q12864 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.79■□□□□ 0.92
CDH17Q12864 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CDH17Q12864 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH17Q12864 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH17Q12864 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH17Q12864 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH17Q12864 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.78■□□□□ 0.92
CDH17Q12864 AC092667.1-201ENST00000434301 2586 ntBASIC20.78■□□□□ 0.92
CDH17Q12864 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH17Q12864 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH17Q12864 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms