Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDH1Q08174 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDH1Q08174 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDH1Q08174 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDH1Q08174 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PCDH1Q08174 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDH1Q08174 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH1Q08174 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH1Q08174 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH1Q08174 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH1Q08174 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH1Q08174 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH1Q08174 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH1Q08174 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH1Q08174 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDH1Q08174 MYCNOS-205ENST00000641950 531 ntBASIC19.87■□□□□ 0.77
PCDH1Q08174 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.87■□□□□ 0.77
PCDH1Q08174 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDH1Q08174 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH1Q08174 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH1Q08174 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDH1Q08174 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDH1Q08174 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH1Q08174 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH1Q08174 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDH1Q08174 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PCDH1Q08174 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH1Q08174 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDH1Q08174 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PCDH1Q08174 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PCDH1Q08174 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH1Q08174 RARRES2P6-201ENST00000567333 442 ntBASIC19.86■□□□□ 0.77
PCDH1Q08174 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.86■□□□□ 0.77
PCDH1Q08174 UBE2DNL-204ENST00000602536 740 ntBASIC19.86■□□□□ 0.77
PCDH1Q08174 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDH1Q08174 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDH1Q08174 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH1Q08174 AP005212.1-201ENST00000581547 1997 ntBASIC19.86■□□□□ 0.77
PCDH1Q08174 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH1Q08174 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH1Q08174 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.86■□□□□ 0.77
PCDH1Q08174 LINC01521-201ENST00000504184 1943 ntBASIC19.86■□□□□ 0.77
PCDH1Q08174 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH1Q08174 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDH1Q08174 GABARAPL3-202ENST00000624044 1851 ntBASIC19.86■□□□□ 0.77
PCDH1Q08174 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDH1Q08174 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH1Q08174 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDH1Q08174 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PCDH1Q08174 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH1Q08174 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH1Q08174 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDH1Q08174 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDH1Q08174 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH1Q08174 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
PCDH1Q08174 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH1Q08174 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH1Q08174 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH1Q08174 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDH1Q08174 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH1Q08174 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDH1Q08174 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH1Q08174 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PCDH1Q08174 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDH1Q08174 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDH1Q08174 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH1Q08174 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDH1Q08174 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH1Q08174 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH1Q08174 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH1Q08174 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PCDH1Q08174 KRT18P11-201ENST00000435214 1283 ntBASIC19.84■□□□□ 0.77
PCDH1Q08174 KRT18P5-201ENST00000436075 1291 ntBASIC19.84■□□□□ 0.77
PCDH1Q08174 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDH1Q08174 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.84■□□□□ 0.77
PCDH1Q08174 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PCDH1Q08174 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PCDH1Q08174 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH1Q08174 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDH1Q08174 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDH1Q08174 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH1Q08174 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PCDH1Q08174 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH1Q08174 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH1Q08174 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
PCDH1Q08174 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PCDH1Q08174 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH1Q08174 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH1Q08174 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH1Q08174 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
PCDH1Q08174 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH1Q08174 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH1Q08174 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PCDH1Q08174 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDH1Q08174 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms