Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL20P78556 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL20P78556 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL20P78556 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.25■□□□□ 0.19
CCL20P78556 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL20P78556 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL20P78556 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 AP004607.7-201ENST00000527152 1677 ntBASIC16.24■□□□□ 0.19
CCL20P78556 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.24■□□□□ 0.19
CCL20P78556 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CCL20P78556 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL20P78556 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL20P78556 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCL20P78556 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CCL20P78556 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL20P78556 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.24■□□□□ 0.19
CCL20P78556 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL20P78556 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.24■□□□□ 0.19
CCL20P78556 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL20P78556 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.24■□□□□ 0.19
CCL20P78556 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.24■□□□□ 0.19
CCL20P78556 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCL20P78556 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCL20P78556 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL20P78556 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.23■□□□□ 0.19
CCL20P78556 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCL20P78556 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL20P78556 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.23■□□□□ 0.19
CCL20P78556 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CCL20P78556 PVT1_1.1-201ENST00000615125 194 ntBASIC16.23■□□□□ 0.19
CCL20P78556 U85056.1-201ENST00000616429 682 ntBASIC16.23■□□□□ 0.19
CCL20P78556 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL20P78556 AC093503.3-201ENST00000624917 2352 ntBASIC16.23■□□□□ 0.19
CCL20P78556 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL20P78556 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL20P78556 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CCL20P78556 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCL20P78556 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCL20P78556 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.23■□□□□ 0.19
CCL20P78556 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL20P78556 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL20P78556 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL20P78556 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCL20P78556 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCL20P78556 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL20P78556 DUX4L18-201ENST00000553347 1267 ntBASIC16.22■□□□□ 0.19
CCL20P78556 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCL20P78556 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL20P78556 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.22■□□□□ 0.19
CCL20P78556 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.22■□□□□ 0.19
CCL20P78556 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCL20P78556 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL20P78556 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CCL20P78556 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCL20P78556 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.21■□□□□ 0.19
CCL20P78556 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL20P78556 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCL20P78556 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms