Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S2P59780 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.7■□□□□ 0.42
AP3S2P59780 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S2P59780 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
AP3S2P59780 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S2P59780 AC116562.4-201ENST00000641316 2276 ntBASIC17.7■□□□□ 0.42
AP3S2P59780 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.7■□□□□ 0.42
AP3S2P59780 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.7■□□□□ 0.42
AP3S2P59780 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
AP3S2P59780 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
AP3S2P59780 AC098818.2-201ENST00000564925 2320 ntBASIC17.7■□□□□ 0.42
AP3S2P59780 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S2P59780 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S2P59780 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
AP3S2P59780 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
AP3S2P59780 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.7■□□□□ 0.42
AP3S2P59780 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S2P59780 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S2P59780 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S2P59780 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S2P59780 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S2P59780 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S2P59780 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3S2P59780 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S2P59780 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.69■□□□□ 0.42
AP3S2P59780 AC133637.1-201ENST00000624115 1537 ntBASIC17.69■□□□□ 0.42
AP3S2P59780 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S2P59780 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
AP3S2P59780 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3S2P59780 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S2P59780 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.69■□□□□ 0.42
AP3S2P59780 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S2P59780 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.69■□□□□ 0.42
AP3S2P59780 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S2P59780 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
AP3S2P59780 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S2P59780 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S2P59780 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3S2P59780 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3S2P59780 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3S2P59780 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S2P59780 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S2P59780 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S2P59780 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
AP3S2P59780 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.68■□□□□ 0.42
AP3S2P59780 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S2P59780 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S2P59780 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.68■□□□□ 0.42
AP3S2P59780 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.68■□□□□ 0.42
AP3S2P59780 AC010141.3-201ENST00000456659 717 ntBASIC17.68■□□□□ 0.42
AP3S2P59780 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S2P59780 FP700111.2-201ENST00000619190 1892 ntBASIC17.68■□□□□ 0.42
AP3S2P59780 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S2P59780 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.68■□□□□ 0.42
AP3S2P59780 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.68■□□□□ 0.42
AP3S2P59780 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S2P59780 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S2P59780 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 AP004607.7-201ENST00000527152 1677 ntBASIC17.67■□□□□ 0.42
AP3S2P59780 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.67■□□□□ 0.42
AP3S2P59780 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AP3S2P59780 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
AP3S2P59780 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3S2P59780 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3S2P59780 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.67■□□□□ 0.42
AP3S2P59780 Z92544.1-202ENST00000571933 1220 ntBASIC17.67■□□□□ 0.42
AP3S2P59780 MIR4508-201ENST00000584178 70 ntBASIC17.67■□□□□ 0.42
AP3S2P59780 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3S2P59780 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.67■□□□□ 0.42
AP3S2P59780 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S2P59780 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3S2P59780 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
AP3S2P59780 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP3S2P59780 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S2P59780 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S2P59780 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AP3S2P59780 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S2P59780 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S2P59780 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
AP3S2P59780 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S2P59780 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S2P59780 RARRES2P2-201ENST00000394842 485 ntBASIC17.66■□□□□ 0.42
AP3S2P59780 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.66■□□□□ 0.42
AP3S2P59780 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.66■□□□□ 0.42
AP3S2P59780 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
AP3S2P59780 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3S2P59780 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AP3S2P59780 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.66■□□□□ 0.42
AP3S2P59780 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
AP3S2P59780 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms