Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.14■□□□□ 0.97
CDH4P55283 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH4P55283 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH4P55283 AF106564.1-201ENST00000607058 2553 ntBASIC21.14■□□□□ 0.97
CDH4P55283 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH4P55283 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH4P55283 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.14■□□□□ 0.97
CDH4P55283 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDH4P55283 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH4P55283 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH4P55283 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.13■□□□□ 0.97
CDH4P55283 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH4P55283 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH4P55283 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH4P55283 MCRIP2P1-201ENST00000394346 511 ntBASIC21.13■□□□□ 0.97
CDH4P55283 AL355802.2-201ENST00000402069 882 ntBASIC21.13■□□□□ 0.97
CDH4P55283 MIPEPP3-201ENST00000412105 444 ntBASIC21.13■□□□□ 0.97
CDH4P55283 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.13■□□□□ 0.97
CDH4P55283 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.13■□□□□ 0.97
CDH4P55283 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH4P55283 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH4P55283 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH4P55283 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH4P55283 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH4P55283 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH4P55283 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.12■□□□□ 0.97
CDH4P55283 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH4P55283 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH4P55283 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH4P55283 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDH4P55283 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH4P55283 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH4P55283 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH4P55283 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH4P55283 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH4P55283 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH4P55283 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.12■□□□□ 0.97
CDH4P55283 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.12■□□□□ 0.97
CDH4P55283 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH4P55283 AC121338.2-201ENST00000622535 1744 ntBASIC21.12■□□□□ 0.97
CDH4P55283 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH4P55283 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDH4P55283 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH4P55283 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDH4P55283 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.11■□□□□ 0.97
CDH4P55283 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDH4P55283 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH4P55283 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH4P55283 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH4P55283 BX276092.2-201ENST00000417668 665 ntBASIC21.11■□□□□ 0.97
CDH4P55283 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH4P55283 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH4P55283 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.11■□□□□ 0.97
CDH4P55283 AL138781.1-201ENST00000566567 1274 ntBASIC21.11■□□□□ 0.97
CDH4P55283 CYP2T3P-201ENST00000601990 817 ntBASIC21.11■□□□□ 0.97
CDH4P55283 CYP21A1P-202ENST00000354927 1481 ntBASIC21.11■□□□□ 0.97
CDH4P55283 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH4P55283 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH4P55283 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH4P55283 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH4P55283 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH4P55283 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CDH4P55283 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH4P55283 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH4P55283 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDH4P55283 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH4P55283 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH4P55283 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH4P55283 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDH4P55283 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDH4P55283 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH4P55283 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH4P55283 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.1■□□□□ 0.97
CDH4P55283 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH4P55283 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH4P55283 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH4P55283 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDH4P55283 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH4P55283 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH4P55283 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH4P55283 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH4P55283 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH4P55283 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.09■□□□□ 0.97
CDH4P55283 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH4P55283 AL355472.2-201ENST00000422958 438 ntBASIC21.09■□□□□ 0.97
CDH4P55283 MIR4758-201ENST00000577688 71 ntBASIC21.09■□□□□ 0.97
CDH4P55283 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH4P55283 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDH4P55283 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH4P55283 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.09■□□□□ 0.97
CDH4P55283 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH4P55283 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH4P55283 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDH4P55283 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH4P55283 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CDH4P55283 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH4P55283 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH4P55283 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH4P55283 AC073210.2-201ENST00000430369 194 ntBASIC21.08■□□□□ 0.97
CDH4P55283 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms