Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKAP51800 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKAP51800 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKAP51800 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKAP51800 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCNKAP51800 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKAP51800 AC069152.1-201ENST00000438030 544 ntBASIC20.24■□□□□ 0.83
CLCNKAP51800 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCNKAP51800 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCNKAP51800 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.24■□□□□ 0.83
CLCNKAP51800 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCNKAP51800 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKAP51800 AC092118.2-201ENST00000613495 667 ntBASIC20.24■□□□□ 0.83
CLCNKAP51800 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCNKAP51800 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCNKAP51800 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKAP51800 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKAP51800 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CLCNKAP51800 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.24■□□□□ 0.83
CLCNKAP51800 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKAP51800 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKAP51800 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKAP51800 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKAP51800 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLCNKAP51800 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.23■□□□□ 0.83
CLCNKAP51800 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKAP51800 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CLCNKAP51800 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCNKAP51800 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
CLCNKAP51800 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKAP51800 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKAP51800 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKAP51800 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLCNKAP51800 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CLCNKAP51800 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCNKAP51800 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.23■□□□□ 0.83
CLCNKAP51800 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKAP51800 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCNKAP51800 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CLCNKAP51800 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKAP51800 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKAP51800 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKAP51800 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKAP51800 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKAP51800 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLCNKAP51800 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.22■□□□□ 0.83
CLCNKAP51800 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.22■□□□□ 0.83
CLCNKAP51800 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCNKAP51800 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.22■□□□□ 0.83
CLCNKAP51800 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CLCNKAP51800 FEM1AP4-201ENST00000443167 1987 ntBASIC20.22■□□□□ 0.83
CLCNKAP51800 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKAP51800 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKAP51800 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLCNKAP51800 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKAP51800 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLCNKAP51800 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCNKAP51800 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.21■□□□□ 0.83
CLCNKAP51800 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCNKAP51800 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCNKAP51800 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.21■□□□□ 0.83
CLCNKAP51800 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLCNKAP51800 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCNKAP51800 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLCNKAP51800 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CLCNKAP51800 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKAP51800 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCNKAP51800 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKAP51800 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.2■□□□□ 0.82
CLCNKAP51800 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKAP51800 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLCNKAP51800 MCRIP2P1-201ENST00000394346 511 ntBASIC20.2■□□□□ 0.82
CLCNKAP51800 BX276092.2-201ENST00000417668 665 ntBASIC20.2■□□□□ 0.82
CLCNKAP51800 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCNKAP51800 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.2■□□□□ 0.82
CLCNKAP51800 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.2■□□□□ 0.82
CLCNKAP51800 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCNKAP51800 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKAP51800 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKAP51800 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKAP51800 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLCNKAP51800 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCNKAP51800 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKAP51800 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKAP51800 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CLCNKAP51800 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKAP51800 AC026310.3-201ENST00000625186 2373 ntBASIC20.2■□□□□ 0.82
CLCNKAP51800 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms