Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.37■■□□□ 1.33
USP11P51784 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
USP11P51784 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
USP11P51784 AL109923.1-201ENST00000618799 583 ntBASIC23.37■■□□□ 1.33
USP11P51784 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.37■■□□□ 1.33
USP11P51784 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
USP11P51784 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
USP11P51784 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP11P51784 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
USP11P51784 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
USP11P51784 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP11P51784 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USP11P51784 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
USP11P51784 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.36■■□□□ 1.33
USP11P51784 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
USP11P51784 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
USP11P51784 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.36■■□□□ 1.33
USP11P51784 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.36■■□□□ 1.33
USP11P51784 AC104771.1-201ENST00000603335 964 ntBASIC23.36■■□□□ 1.33
USP11P51784 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP11P51784 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP11P51784 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP11P51784 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.36■■□□□ 1.33
USP11P51784 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP11P51784 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.36■■□□□ 1.33
USP11P51784 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
USP11P51784 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP11P51784 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP11P51784 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP11P51784 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP11P51784 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.35■■□□□ 1.33
USP11P51784 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.35■■□□□ 1.33
USP11P51784 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP11P51784 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.35■■□□□ 1.33
USP11P51784 MKRN4P-201ENST00000444706 1521 ntBASIC23.35■■□□□ 1.33
USP11P51784 PLK5-205ENST00000642079 1969 ntBASIC23.35■■□□□ 1.33
USP11P51784 MCRIP2P1-201ENST00000394346 511 ntBASIC23.35■■□□□ 1.33
USP11P51784 HLA-L-209ENST00000420110 1011 ntBASIC23.35■■□□□ 1.33
USP11P51784 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.35■■□□□ 1.33
USP11P51784 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
USP11P51784 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.35■■□□□ 1.33
USP11P51784 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.35■■□□□ 1.33
USP11P51784 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP11P51784 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP11P51784 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP11P51784 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP11P51784 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP11P51784 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
USP11P51784 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP11P51784 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP11P51784 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP11P51784 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.34■■□□□ 1.33
USP11P51784 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.34■■□□□ 1.33
USP11P51784 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP11P51784 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.34■■□□□ 1.33
USP11P51784 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP11P51784 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.33■■□□□ 1.33
USP11P51784 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.33■■□□□ 1.33
USP11P51784 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP11P51784 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP11P51784 AC027702.1-201ENST00000563810 1770 ntBASIC23.33■■□□□ 1.33
USP11P51784 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP11P51784 CYP21A1P-202ENST00000354927 1481 ntBASIC23.33■■□□□ 1.33
USP11P51784 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
USP11P51784 SLC29A4P1-201ENST00000398760 971 ntBASIC23.33■■□□□ 1.33
USP11P51784 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.33■■□□□ 1.33
USP11P51784 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.33■■□□□ 1.33
USP11P51784 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP11P51784 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.32
USP11P51784 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
USP11P51784 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.33■■□□□ 1.32
USP11P51784 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
USP11P51784 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
USP11P51784 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP11P51784 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP11P51784 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP11P51784 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
USP11P51784 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.32■■□□□ 1.32
USP11P51784 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP11P51784 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP11P51784 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP11P51784 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.32■■□□□ 1.32
USP11P51784 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.32■■□□□ 1.32
USP11P51784 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP11P51784 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.32■■□□□ 1.32
USP11P51784 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP11P51784 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP11P51784 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP11P51784 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
USP11P51784 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP11P51784 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP11P51784 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP11P51784 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP11P51784 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP11P51784 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP11P51784 MIPEPP3-201ENST00000412105 444 ntBASIC23.31■■□□□ 1.32
USP11P51784 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.31■■□□□ 1.32
USP11P51784 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.31■■□□□ 1.32
USP11P51784 CYP2T3P-201ENST00000601990 817 ntBASIC23.31■■□□□ 1.32
USP11P51784 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms