Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.71■■□□□ 1.07
TUBP50607 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.71■■□□□ 1.07
TUBP50607 AC133041.1-202ENST00000642053 222 ntBASIC21.71■■□□□ 1.07
TUBP50607 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.71■■□□□ 1.07
TUBP50607 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBP50607 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBP50607 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.71■■□□□ 1.07
TUBP50607 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBP50607 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBP50607 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.71■■□□□ 1.07
TUBP50607 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TUBP50607 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TUBP50607 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.7■■□□□ 1.06
TUBP50607 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.7■■□□□ 1.06
TUBP50607 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TUBP50607 CDV3P1-201ENST00000471403 739 ntBASIC21.7■■□□□ 1.06
TUBP50607 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.7■■□□□ 1.06
TUBP50607 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.7■■□□□ 1.06
TUBP50607 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.7■■□□□ 1.06
TUBP50607 MIR4758-201ENST00000577688 71 ntBASIC21.7■■□□□ 1.06
TUBP50607 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.7■■□□□ 1.06
TUBP50607 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TUBP50607 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TUBP50607 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TUBP50607 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TUBP50607 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.7■■□□□ 1.06
TUBP50607 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.7■■□□□ 1.06
TUBP50607 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.7■■□□□ 1.06
TUBP50607 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.69■■□□□ 1.06
TUBP50607 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 MIPEPP3-201ENST00000412105 444 ntBASIC21.69■■□□□ 1.06
TUBP50607 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.69■■□□□ 1.06
TUBP50607 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.69■■□□□ 1.06
TUBP50607 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.69■■□□□ 1.06
TUBP50607 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TUBP50607 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TUBP50607 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.69■■□□□ 1.06
TUBP50607 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBP50607 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBP50607 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.68■■□□□ 1.06
TUBP50607 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.68■■□□□ 1.06
TUBP50607 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TUBP50607 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.68■■□□□ 1.06
TUBP50607 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.68■■□□□ 1.06
TUBP50607 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
TUBP50607 AC092118.2-201ENST00000613495 667 ntBASIC21.68■■□□□ 1.06
TUBP50607 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TUBP50607 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.68■■□□□ 1.06
TUBP50607 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBP50607 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.68■■□□□ 1.06
TUBP50607 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TUBP50607 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBP50607 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBP50607 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TUBP50607 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.67■■□□□ 1.06
TUBP50607 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBP50607 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TUBP50607 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 AC010980.2-201ENST00000587099 1412 ntBASIC21.67■■□□□ 1.06
TUBP50607 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBP50607 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.67■■□□□ 1.06
TUBP50607 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.67■■□□□ 1.06
TUBP50607 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBP50607 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBP50607 AC100791.3-201ENST00000617619 330 ntBASIC21.67■■□□□ 1.06
TUBP50607 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBP50607 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TUBP50607 Z98882.1-201ENST00000622160 2253 ntBASIC21.67■■□□□ 1.06
TUBP50607 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBP50607 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
TUBP50607 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TUBP50607 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TUBP50607 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBP50607 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TUBP50607 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBP50607 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBP50607 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.66■■□□□ 1.06
TUBP50607 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBP50607 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TUBP50607 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms