Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.67■□□□□ 0.9
ARCN1P48444 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARCN1P48444 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARCN1P48444 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
ARCN1P48444 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARCN1P48444 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARCN1P48444 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARCN1P48444 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARCN1P48444 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ARCN1P48444 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ARCN1P48444 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
ARCN1P48444 AC245052.3-201ENST00000450182 901 ntBASIC20.66■□□□□ 0.9
ARCN1P48444 AL137784.2-201ENST00000607332 1000 ntBASIC20.66■□□□□ 0.9
ARCN1P48444 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.66■□□□□ 0.9
ARCN1P48444 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.66■□□□□ 0.9
ARCN1P48444 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ARCN1P48444 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARCN1P48444 AC027702.1-201ENST00000563810 1770 ntBASIC20.66■□□□□ 0.9
ARCN1P48444 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARCN1P48444 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARCN1P48444 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ARCN1P48444 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARCN1P48444 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARCN1P48444 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ARCN1P48444 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.65■□□□□ 0.9
ARCN1P48444 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARCN1P48444 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARCN1P48444 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARCN1P48444 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ARCN1P48444 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.65■□□□□ 0.9
ARCN1P48444 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.65■□□□□ 0.9
ARCN1P48444 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.65■□□□□ 0.9
ARCN1P48444 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.65■□□□□ 0.9
ARCN1P48444 AC137761.2-201ENST00000561729 223 ntBASIC20.65■□□□□ 0.9
ARCN1P48444 AC145350.3-201ENST00000569033 163 ntBASIC20.65■□□□□ 0.9
ARCN1P48444 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.65■□□□□ 0.9
ARCN1P48444 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARCN1P48444 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ARCN1P48444 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARCN1P48444 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARCN1P48444 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARCN1P48444 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARCN1P48444 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ARCN1P48444 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.64■□□□□ 0.9
ARCN1P48444 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ARCN1P48444 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARCN1P48444 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
ARCN1P48444 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARCN1P48444 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARCN1P48444 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARCN1P48444 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARCN1P48444 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARCN1P48444 FP700111.2-201ENST00000619190 1892 ntBASIC20.64■□□□□ 0.89
ARCN1P48444 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ARCN1P48444 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARCN1P48444 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.64■□□□□ 0.89
ARCN1P48444 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARCN1P48444 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARCN1P48444 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARCN1P48444 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
ARCN1P48444 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.63■□□□□ 0.89
ARCN1P48444 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.63■□□□□ 0.89
ARCN1P48444 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.63■□□□□ 0.89
ARCN1P48444 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARCN1P48444 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARCN1P48444 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARCN1P48444 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.63■□□□□ 0.89
ARCN1P48444 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.63■□□□□ 0.89
ARCN1P48444 SLC7A5P1-201ENST00000568957 537 ntBASIC20.63■□□□□ 0.89
ARCN1P48444 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARCN1P48444 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ARCN1P48444 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARCN1P48444 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARCN1P48444 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARCN1P48444 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARCN1P48444 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARCN1P48444 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ARCN1P48444 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.62■□□□□ 0.89
ARCN1P48444 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.62■□□□□ 0.89
ARCN1P48444 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ARCN1P48444 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ARCN1P48444 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARCN1P48444 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARCN1P48444 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.62■□□□□ 0.89
ARCN1P48444 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ARCN1P48444 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARCN1P48444 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARCN1P48444 AC016769.1-201ENST00000409132 1010 ntBASIC20.62■□□□□ 0.89
ARCN1P48444 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.62■□□□□ 0.89
ARCN1P48444 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARCN1P48444 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.62■□□□□ 0.89
ARCN1P48444 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.62■□□□□ 0.89
ARCN1P48444 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.62■□□□□ 0.89
ARCN1P48444 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARCN1P48444 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARCN1P48444 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARCN1P48444 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.62■□□□□ 0.89
ARCN1P48444 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARCN1P48444 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
ARCN1P48444 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms