Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CXCL5P42830 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CXCL5P42830 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 AC009237.3-201ENST00000393279 1427 ntBASIC13.85□□□□□ -0.19
CXCL5P42830 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CXCL5P42830 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 SERBP1P1-201ENST00000396021 1160 ntBASIC13.85□□□□□ -0.19
CXCL5P42830 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.85□□□□□ -0.19
CXCL5P42830 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCL5P42830 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCL5P42830 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.85□□□□□ -0.19
CXCL5P42830 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CXCL5P42830 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CXCL5P42830 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CXCL5P42830 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CXCL5P42830 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL5P42830 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 PLK5-205ENST00000642079 1969 ntBASIC13.84□□□□□ -0.19
CXCL5P42830 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CXCL5P42830 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.84□□□□□ -0.19
CXCL5P42830 SLC47A1P1-202ENST00000449666 945 ntBASIC13.84□□□□□ -0.19
CXCL5P42830 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.84□□□□□ -0.19
CXCL5P42830 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CXCL5P42830 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CXCL5P42830 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CXCL5P42830 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CXCL5P42830 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CXCL5P42830 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.83□□□□□ -0.2
CXCL5P42830 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CXCL5P42830 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CXCL5P42830 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.83□□□□□ -0.2
CXCL5P42830 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.83□□□□□ -0.2
CXCL5P42830 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CXCL5P42830 AC026471.1-201ENST00000564629 3026 ntBASIC13.82□□□□□ -0.2
CXCL5P42830 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL5P42830 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CXCL5P42830 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL5P42830 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL5P42830 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL5P42830 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL5P42830 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL5P42830 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL5P42830 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL5P42830 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL5P42830 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL5P42830 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL5P42830 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL5P42830 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL5P42830 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CXCL5P42830 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CXCL5P42830 AL512631.2-201ENST00000604634 923 ntBASIC13.82□□□□□ -0.2
CXCL5P42830 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL5P42830 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms