Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PCK1P35558 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCK1P35558 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCK1P35558 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PCK1P35558 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
PCK1P35558 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCK1P35558 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCK1P35558 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCK1P35558 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.64■■□□□ 1.05
PCK1P35558 AC245052.3-201ENST00000450182 901 ntBASIC21.64■■□□□ 1.05
PCK1P35558 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.64■■□□□ 1.05
PCK1P35558 SLC7A5P1-201ENST00000568957 537 ntBASIC21.64■■□□□ 1.05
PCK1P35558 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.64■■□□□ 1.05
PCK1P35558 AC011484.1-201ENST00000377652 1995 ntBASIC21.64■■□□□ 1.05
PCK1P35558 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCK1P35558 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCK1P35558 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCK1P35558 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCK1P35558 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCK1P35558 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCK1P35558 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCK1P35558 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCK1P35558 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PCK1P35558 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCK1P35558 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.63■■□□□ 1.05
PCK1P35558 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.63■■□□□ 1.05
PCK1P35558 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCK1P35558 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCK1P35558 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCK1P35558 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCK1P35558 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCK1P35558 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCK1P35558 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.63■■□□□ 1.05
PCK1P35558 AC034268.1-201ENST00000441047 882 ntBASIC21.63■■□□□ 1.05
PCK1P35558 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.63■■□□□ 1.05
PCK1P35558 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.63■■□□□ 1.05
PCK1P35558 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.63■■□□□ 1.05
PCK1P35558 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
PCK1P35558 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCK1P35558 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PCK1P35558 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCK1P35558 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
PCK1P35558 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCK1P35558 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCK1P35558 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCK1P35558 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PCK1P35558 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PCK1P35558 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCK1P35558 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCK1P35558 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.62■■□□□ 1.05
PCK1P35558 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PCK1P35558 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCK1P35558 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
PCK1P35558 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCK1P35558 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCK1P35558 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCK1P35558 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.62■■□□□ 1.05
PCK1P35558 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCK1P35558 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PCK1P35558 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
PCK1P35558 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCK1P35558 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCK1P35558 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCK1P35558 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCK1P35558 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.61■■□□□ 1.05
PCK1P35558 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCK1P35558 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCK1P35558 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCK1P35558 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCK1P35558 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCK1P35558 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.61■■□□□ 1.05
PCK1P35558 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.61■■□□□ 1.05
PCK1P35558 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.61■■□□□ 1.05
PCK1P35558 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCK1P35558 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.61■■□□□ 1.05
PCK1P35558 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCK1P35558 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCK1P35558 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.6■■□□□ 1.05
PCK1P35558 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.6■■□□□ 1.05
PCK1P35558 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.6■■□□□ 1.05
PCK1P35558 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.6■■□□□ 1.05
PCK1P35558 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
PCK1P35558 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.6■■□□□ 1.05
PCK1P35558 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCK1P35558 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.6■■□□□ 1.05
PCK1P35558 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.6■■□□□ 1.05
PCK1P35558 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCK1P35558 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCK1P35558 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCK1P35558 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms