Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN3P26045 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN3P26045 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN3P26045 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPN3P26045 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPN3P26045 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PTPN3P26045 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN3P26045 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
PTPN3P26045 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN3P26045 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN3P26045 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.04■□□□□ 0.96
PTPN3P26045 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.04■□□□□ 0.96
PTPN3P26045 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN3P26045 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.04■□□□□ 0.96
PTPN3P26045 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PTPN3P26045 AC116050.2-201ENST00000612102 1779 ntBASIC21.04■□□□□ 0.96
PTPN3P26045 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN3P26045 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PTPN3P26045 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.04■□□□□ 0.96
PTPN3P26045 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PTPN3P26045 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN3P26045 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN3P26045 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN3P26045 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PTPN3P26045 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN3P26045 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PTPN3P26045 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN3P26045 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN3P26045 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN3P26045 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.03■□□□□ 0.96
PTPN3P26045 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.03■□□□□ 0.96
PTPN3P26045 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.03■□□□□ 0.96
PTPN3P26045 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN3P26045 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PTPN3P26045 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.03■□□□□ 0.96
PTPN3P26045 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.03■□□□□ 0.96
PTPN3P26045 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN3P26045 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN3P26045 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PTPN3P26045 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PTPN3P26045 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN3P26045 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
PTPN3P26045 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN3P26045 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN3P26045 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.02■□□□□ 0.96
PTPN3P26045 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PTPN3P26045 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PTPN3P26045 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.02■□□□□ 0.96
PTPN3P26045 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.02■□□□□ 0.96
PTPN3P26045 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPN3P26045 AL162430.1-201ENST00000480705 870 ntBASIC21.02■□□□□ 0.96
PTPN3P26045 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PTPN3P26045 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPN3P26045 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PTPN3P26045 AC137761.2-201ENST00000561729 223 ntBASIC21.02■□□□□ 0.96
PTPN3P26045 AC145350.3-201ENST00000569033 163 ntBASIC21.02■□□□□ 0.96
PTPN3P26045 MIR5787-201ENST00000611784 55 ntBASIC21.02■□□□□ 0.96
PTPN3P26045 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PTPN3P26045 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN3P26045 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.02■□□□□ 0.96
PTPN3P26045 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN3P26045 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTPN3P26045 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN3P26045 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN3P26045 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PTPN3P26045 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.01■□□□□ 0.95
PTPN3P26045 FP700111.2-201ENST00000619190 1892 ntBASIC21.01■□□□□ 0.95
PTPN3P26045 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.01■□□□□ 0.95
PTPN3P26045 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN3P26045 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN3P26045 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN3P26045 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN3P26045 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.01■□□□□ 0.95
PTPN3P26045 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN3P26045 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN3P26045 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.01■□□□□ 0.95
PTPN3P26045 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN3P26045 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN3P26045 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN3P26045 LINC01006-201ENST00000333319 2292 ntBASIC21.01■□□□□ 0.95
PTPN3P26045 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PTPN3P26045 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN3P26045 AC027702.1-201ENST00000563810 1770 ntBASIC21■□□□□ 0.95
PTPN3P26045 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN3P26045 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN3P26045 AC073314.1-201ENST00000568729 2216 ntBASIC21■□□□□ 0.95
PTPN3P26045 UQCRFS1P1-201ENST00000435169 820 ntBASIC21■□□□□ 0.95
PTPN3P26045 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PTPN3P26045 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21■□□□□ 0.95
PTPN3P26045 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21■□□□□ 0.95
PTPN3P26045 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
PTPN3P26045 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN3P26045 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPN3P26045 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21■□□□□ 0.95
PTPN3P26045 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
PTPN3P26045 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN3P26045 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN3P26045 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN3P26045 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN3P26045 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms