Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.15■□□□□ 0.34
ATF4P18848 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.15■□□□□ 0.34
ATF4P18848 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.15■□□□□ 0.34
ATF4P18848 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.15■□□□□ 0.34
ATF4P18848 AC004448.1-201ENST00000458332 883 ntBASIC17.15■□□□□ 0.34
ATF4P18848 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.15■□□□□ 0.34
ATF4P18848 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
ATF4P18848 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.15■□□□□ 0.34
ATF4P18848 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.15■□□□□ 0.34
ATF4P18848 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.15■□□□□ 0.34
ATF4P18848 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
ATF4P18848 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.15■□□□□ 0.34
ATF4P18848 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATF4P18848 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.15■□□□□ 0.34
ATF4P18848 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
ATF4P18848 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ATF4P18848 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ATF4P18848 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATF4P18848 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATF4P18848 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATF4P18848 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF4P18848 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.13■□□□□ 0.33
ATF4P18848 FEM1AP4-201ENST00000443167 1987 ntBASIC17.13■□□□□ 0.33
ATF4P18848 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF4P18848 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF4P18848 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
ATF4P18848 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF4P18848 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
ATF4P18848 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF4P18848 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.13■□□□□ 0.33
ATF4P18848 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF4P18848 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.13■□□□□ 0.33
ATF4P18848 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ATF4P18848 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.13■□□□□ 0.33
ATF4P18848 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF4P18848 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ATF4P18848 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ATF4P18848 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATF4P18848 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ATF4P18848 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF4P18848 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.13■□□□□ 0.33
ATF4P18848 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.13■□□□□ 0.33
ATF4P18848 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATF4P18848 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF4P18848 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF4P18848 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF4P18848 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF4P18848 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF4P18848 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.12■□□□□ 0.33
ATF4P18848 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATF4P18848 KRT125P-201ENST00000546827 989 ntBASIC17.12■□□□□ 0.33
ATF4P18848 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATF4P18848 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATF4P18848 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.12■□□□□ 0.33
ATF4P18848 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ATF4P18848 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.11■□□□□ 0.33
ATF4P18848 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ATF4P18848 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.11■□□□□ 0.33
ATF4P18848 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATF4P18848 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATF4P18848 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 BX664725.1-201ENST00000438252 379 ntBASIC17.11■□□□□ 0.33
ATF4P18848 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.11■□□□□ 0.33
ATF4P18848 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.11■□□□□ 0.33
ATF4P18848 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.11■□□□□ 0.33
ATF4P18848 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATF4P18848 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.11■□□□□ 0.33
ATF4P18848 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATF4P18848 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATF4P18848 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms