Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIST1H1CP16403 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.5■□□□□ 0.55
HIST1H1CP16403 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HIST1H1CP16403 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HIST1H1CP16403 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
HIST1H1CP16403 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.49■□□□□ 0.55
HIST1H1CP16403 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HIST1H1CP16403 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HIST1H1CP16403 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.49■□□□□ 0.55
HIST1H1CP16403 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIST1H1CP16403 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HIST1H1CP16403 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1CP16403 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1CP16403 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1CP16403 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1CP16403 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1CP16403 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1CP16403 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1CP16403 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1CP16403 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 AC138907.5-202ENST00000569484 235 ntBASIC18.48■□□□□ 0.55
HIST1H1CP16403 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1CP16403 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIST1H1CP16403 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.48■□□□□ 0.55
HIST1H1CP16403 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1CP16403 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1CP16403 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1CP16403 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H1CP16403 IRS3P-201ENST00000223076 1006 ntBASIC18.47■□□□□ 0.55
HIST1H1CP16403 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1CP16403 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.47■□□□□ 0.55
HIST1H1CP16403 AC005837.3-201ENST00000612163 286 ntBASIC18.47■□□□□ 0.55
HIST1H1CP16403 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.47■□□□□ 0.55
HIST1H1CP16403 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HIST1H1CP16403 AL512408.1-201ENST00000569378 2000 ntBASIC18.47■□□□□ 0.55
HIST1H1CP16403 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1CP16403 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
HIST1H1CP16403 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HIST1H1CP16403 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1CP16403 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
HIST1H1CP16403 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
HIST1H1CP16403 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1CP16403 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.46■□□□□ 0.55
HIST1H1CP16403 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1CP16403 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1CP16403 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.46■□□□□ 0.55
HIST1H1CP16403 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1CP16403 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HIST1H1CP16403 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1CP16403 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1CP16403 AC105265.2-201ENST00000467189 838 ntBASIC18.46■□□□□ 0.55
HIST1H1CP16403 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.46■□□□□ 0.55
HIST1H1CP16403 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HIST1H1CP16403 RARRES2P11-201ENST00000635158 484 ntBASIC18.46■□□□□ 0.55
HIST1H1CP16403 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1CP16403 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1CP16403 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.46■□□□□ 0.55
HIST1H1CP16403 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.46■□□□□ 0.55
HIST1H1CP16403 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
HIST1H1CP16403 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HIST1H1CP16403 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HIST1H1CP16403 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
HIST1H1CP16403 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H1CP16403 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1CP16403 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.45■□□□□ 0.54
HIST1H1CP16403 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
HIST1H1CP16403 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1CP16403 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1CP16403 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HIST1H1CP16403 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.45■□□□□ 0.54
HIST1H1CP16403 AC027612.3-201ENST00000413684 1047 ntBASIC18.45■□□□□ 0.54
HIST1H1CP16403 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1CP16403 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HIST1H1CP16403 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms